Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SEPT14P19-203ENST00000633205 211 ntBASIC1.77□□□□□ -2.13
RFX4Q33E94 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
RFX4Q33E94 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.76□□□□□ -2.13
RFX4Q33E94 Y_RNA.40-201ENST00000362645 93 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 RNU6-1032P-201ENST00000384100 107 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 SNORA67.3-201ENST00000384366 140 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 SNORA64-201ENST00000384674 134 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 MIR676-201ENST00000390702 67 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RFX4Q33E94 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RFX4Q33E94 UBE2V1P10-201ENST00000414685 269 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 EIF1AXP1-201ENST00000419267 435 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 AL445646.1-201ENST00000431784 216 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 AC096638.1-201ENST00000444678 216 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 AL360221.1-201ENST00000445989 335 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.76□□□□□ -2.13
RFX4Q33E94 AL353705.4-201ENST00000449661 238 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 AC006512.1-201ENST00000468816 291 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 AC107032.1-201ENST00000485945 480 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 RPL9P6-201ENST00000492764 598 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 MRPS17P9-201ENST00000511924 393 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 RNU6-1178P-201ENST00000516674 107 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.76□□□□□ -2.13
RFX4Q33E94 MTND2P38-201ENST00000522536 667 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 AP000873.5-201ENST00000533906 236 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.76□□□□□ -2.13
RFX4Q33E94 AL391840.1-201ENST00000571144 367 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 AC090897.2-201ENST00000581715 130 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 AC008752.3-201ENST00000588113 712 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 AC091834.1-201ENST00000614543 472 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 AC090582.1-201ENST00000636321 199 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 MIR3529-201ENST00000637713 78 ntBASIC1.76□□□□□ -2.13
RFX4Q33E94 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.76□□□□□ -2.13
RFX4Q33E94 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.76□□□□□ -2.13
RFX4Q33E94 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
RFX4Q33E94 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
RFX4Q33E94 AC138393.1-203ENST00000327086 343 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 RNU6-78P-201ENST00000362897 107 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 RNU6-529P-201ENST00000363383 104 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 RNU6-487P-201ENST00000365430 104 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 SNORD116-1-201ENST00000384335 95 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 DEFB108C-201ENST00000400154 252 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 AL512604.1-201ENST00000404812 257 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 RN7SKP223-201ENST00000410582 62 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.75□□□□□ -2.13
RFX4Q33E94 DPH3P2-201ENST00000422618 250 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 AIMP1P2-201ENST00000425294 312 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.75□□□□□ -2.13
RFX4Q33E94 HMGB1P31-201ENST00000437242 427 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.75□□□□□ -2.13
RFX4Q33E94 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.75□□□□□ -2.13
RFX4Q33E94 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.75□□□□□ -2.13
RFX4Q33E94 AC008549.1-201ENST00000512900 643 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.75□□□□□ -2.13
RFX4Q33E94 AC007375.1-201ENST00000554513 578 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.75□□□□□ -2.13
RFX4Q33E94 AC068790.2-201ENST00000602601 557 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 AL391646.1-201ENST00000603860 190 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 AC008945.2-201ENST00000606056 604 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 AC026585.1-201ENST00000619582 524 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 YWHAEP7-203ENST00000622054 312 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 ZNF680P1-201ENST00000436625 1469 ntBASIC1.75□□□□□ -2.13
RFX4Q33E94 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
RFX4Q33E94 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
RFX4Q33E94 OR4G2P-201ENST00000328113 903 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 RNU6-1010P-201ENST00000362757 107 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 SNORD114-19-201ENST00000363072 75 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 SNORA16.1-201ENST00000364597 132 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 SNORD116-9-201ENST00000384000 95 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 SNORD116-3-201ENST00000384287 95 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 SNORD116-7-201ENST00000384404 95 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 SNORD116-5-201ENST00000384462 95 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 RNU1-57P-201ENST00000384491 166 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 RNU6-1127P-201ENST00000384580 107 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 RNU6-606P-201ENST00000384721 111 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 MIR186-201ENST00000384988 86 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 MIR95-201ENST00000385072 81 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 SNORA16.2-201ENST00000390991 127 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 AL591034.2-201ENST00000402839 359 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 SNORA3.2-201ENST00000408221 125 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 CDK8P2-201ENST00000415020 547 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 AC074117.2-201ENST00000417130 397 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 MTATP6P18-201ENST00000417994 673 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 AL139415.2-201ENST00000431968 163 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.74□□□□□ -2.13
RFX4Q33E94 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.74□□□□□ -2.13
RFX4Q33E94 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.74□□□□□ -2.13
RFX4Q33E94 RPL23AP3-201ENST00000453844 468 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.74□□□□□ -2.13
RFX4Q33E94 MTCYBP40-201ENST00000509390 1135 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 AC074344.1-201ENST00000512823 224 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 AC104136.1-201ENST00000512969 394 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 RN7SKP219-201ENST00000516825 296 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.74□□□□□ -2.13
RFX4Q33E94 RN7SKP299-201ENST00000606679 301 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.74□□□□□ -2.13
RFX4Q33E94 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms