Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MIR4775-201ENST00000581168 75 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 MIR4448-201ENST00000584360 86 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 AC073648.5-201ENST00000603502 305 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 AC009509.4-201ENST00000619202 509 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 AC138649.3-201ENST00000622154 254 ntBASIC2.29□□□□□ -2.04
SHROOM1Q2M3G4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-1097P-201ENST00000363586 107 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-748P-201ENST00000384648 107 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 MIR583-201ENST00000384846 75 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 MIR454-201ENST00000390180 115 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-550P-201ENST00000391057 101 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 CIR1P3-201ENST00000405137 479 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 U3.40-201ENST00000408706 208 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 HMGB3P2-201ENST00000411913 584 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 AL451074.3-201ENST00000437709 472 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 AC132479.1-201ENST00000449160 144 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 AC112771.1-201ENST00000463581 102 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 RNU1-86P-201ENST00000516108 154 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 RNU1-107P-201ENST00000516617 154 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-1178P-201ENST00000516674 107 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 RNA5SP503-201ENST00000517047 117 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 RNU6-685P-201ENST00000517088 95 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 RNU2-19P-201ENST00000517288 84 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 PIGPP4-201ENST00000584447 307 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 AC005034.5-201ENST00000604219 466 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 AC008536.2-201ENST00000607284 349 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 MIR8081-201ENST00000611533 95 ntBASIC2.28□□□□□ -2.04
SHROOM1Q2M3G4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.28□□□□□ -2.05
SHROOM1Q2M3G4 MIR412-201ENST00000362142 91 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 Y_RNA.140-201ENST00000363474 103 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 SNORD14B-201ENST00000364533 90 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 RNU6-384P-201ENST00000364900 104 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 MIR9-3-201ENST00000385084 90 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 RNU6-1140P-201ENST00000410517 106 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 AL356379.1-201ENST00000414105 126 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 CDK8P2-201ENST00000415020 547 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 MTATP6P26-201ENST00000445926 662 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 RNU7-182P-201ENST00000459009 62 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 SMURF2P1-201ENST00000514992 481 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 RN7SKP298-201ENST00000515950 94 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 MTCO2P4-201ENST00000517968 247 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 AP002963.1-201ENST00000530590 184 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 MTCYBP33-201ENST00000575007 1130 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 AC073539.2-201ENST00000597113 165 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 AL138889.2-201ENST00000603883 242 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 AC009161.2-201ENST00000624626 138 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 SEPT14P19-203ENST00000633205 211 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 AP000553.5-201ENST00000641933 54 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 MTND5P17-201ENST00000418405 1603 ntBASIC2.27□□□□□ -2.05
SHROOM1Q2M3G4 RNU1-148P-201ENST00000384472 162 ntBASIC2.26□□□□□ -2.05
SHROOM1Q2M3G4 AL033519.2-201ENST00000403958 392 ntBASIC2.26□□□□□ -2.05
SHROOM1Q2M3G4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.26□□□□□ -2.05
SHROOM1Q2M3G4 AL445685.2-201ENST00000422551 342 ntBASIC2.26□□□□□ -2.05
SHROOM1Q2M3G4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.26□□□□□ -2.05
SHROOM1Q2M3G4 RPL36AP48-201ENST00000485521 314 ntBASIC2.26□□□□□ -2.05
SHROOM1Q2M3G4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.26□□□□□ -2.05
SHROOM1Q2M3G4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.26□□□□□ -2.05
SHROOM1Q2M3G4 AC068790.2-201ENST00000602601 557 ntBASIC2.26□□□□□ -2.05
SHROOM1Q2M3G4 AL627230.6-201ENST00000611129 280 ntBASIC2.26□□□□□ -2.05
SHROOM1Q2M3G4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.26□□□□□ -2.05
SHROOM1Q2M3G4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SHROOM1Q2M3G4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 Y_RNA.159-201ENST00000363674 87 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 RNU6-1303P-201ENST00000364841 107 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AL512604.1-201ENST00000404812 257 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 BTF3L4P1-201ENST00000413813 468 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 MTCYBP5-201ENST00000423752 1135 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AL627311.1-201ENST00000431514 115 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 CALM1P1-201ENST00000442082 433 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AC003071.1-201ENST00000451219 789 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AL021397.1-201ENST00000451806 248 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 RPS3AP17-201ENST00000472594 777 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AC055731.1-201ENST00000474387 401 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 SNORD27.1-201ENST00000516319 72 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 Y_RNA.687-201ENST00000516558 91 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 RNA5SP137-201ENST00000516833 135 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 SNORA31.25-201ENST00000517242 134 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AL109918.3-201ENST00000603072 338 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms