Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 AL589823.1-201ENST00000429577 183 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.83□□□□□ -2.12
SF3A2Q15428 AC119618.1-201ENST00000434191 222 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 AL451074.3-201ENST00000437709 472 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 AL161788.1-201ENST00000441805 169 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 RPL7P43-201ENST00000478876 753 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 RPS29P11-201ENST00000496507 171 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 MTND3P5-201ENST00000512798 333 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 Y_RNA.655-201ENST00000515919 96 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 SNORA4.4-201ENST00000515921 135 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 RNU5B-3P-201ENST00000516601 115 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 RNU2-19P-201ENST00000517288 84 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 OR5B19P-201ENST00000531766 928 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 NDUFA5P6-201ENST00000542110 379 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.83□□□□□ -2.12
SF3A2Q15428 AC087752.4-201ENST00000605911 462 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 AC103591.3-201ENST00000608684 209 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 AL162373.1-201ENST00000620433 407 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.83□□□□□ -2.12
SF3A2Q15428 AC091932.3-201ENST00000624223 323 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.83□□□□□ -2.12
SF3A2Q15428 AC099654.13-201ENST00000639774 207 ntBASIC1.83□□□□□ -2.12
SF3A2Q15428 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
SF3A2Q15428 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SF3A2Q15428 FGF7P2-201ENST00000332473 296 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 RNU6-858P-201ENST00000362436 107 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 RNU6-623P-201ENST00000363143 105 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 SNORD56.2-201ENST00000363242 71 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 RNA5SP240-201ENST00000365355 128 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
SF3A2Q15428 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.82□□□□□ -2.12
SF3A2Q15428 RNU6-1032P-201ENST00000384100 107 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AL591034.2-201ENST00000402839 359 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.82□□□□□ -2.12
SF3A2Q15428 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.82□□□□□ -2.12
SF3A2Q15428 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.82□□□□□ -2.12
SF3A2Q15428 DLGAP5P1-201ENST00000430307 464 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.82□□□□□ -2.12
SF3A2Q15428 USP9YP29-201ENST00000445112 563 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AL583843.1-201ENST00000456070 346 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 CYP2C59P-201ENST00000457790 269 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 RNU7-95P-201ENST00000459222 64 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AC107032.1-201ENST00000485945 480 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.82□□□□□ -2.12
SF3A2Q15428 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.82□□□□□ -2.12
SF3A2Q15428 MTCO3P7-201ENST00000510008 774 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AC079140.3-201ENST00000511111 550 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 FABP5P5-201ENST00000515537 406 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AC087441.2-201ENST00000529141 262 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.82□□□□□ -2.12
SF3A2Q15428 AC233702.2-202ENST00000562547 291 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 MIR1273C-201ENST00000578669 77 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.82□□□□□ -2.12
SF3A2Q15428 MIR3611-201ENST00000584484 83 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AC007229.1-201ENST00000590455 412 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AC008749.1-201ENST00000597650 306 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AC112191.3-201ENST00000604371 277 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 NDUFA8P1-201ENST00000605525 367 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 RNU6-87P-201ENST00000607561 108 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.82□□□□□ -2.12
SF3A2Q15428 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 HULC.1-201ENST00000612720 240 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.82□□□□□ -2.12
SF3A2Q15428 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AC092656.1-203ENST00000624134 423 ntBASIC1.82□□□□□ -2.12
SF3A2Q15428 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.82□□□□□ -2.12
SF3A2Q15428 AC138393.1-203ENST00000327086 343 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 RNU6-960P-201ENST00000364056 120 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 RNU4-75P-201ENST00000364621 146 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 Y_RNA.559-201ENST00000384686 107 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 SNORD116-4-201ENST00000384733 96 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 MIR95-201ENST00000385072 81 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 SNORD115.1-201ENST00000391109 76 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.81□□□□□ -2.12
SF3A2Q15428 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.81□□□□□ -2.12
SF3A2Q15428 USP9YP15-201ENST00000442391 422 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.81□□□□□ -2.12
SF3A2Q15428 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.81□□□□□ -2.12
SF3A2Q15428 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.81□□□□□ -2.12
SF3A2Q15428 RNU2-10P-201ENST00000516375 211 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.81□□□□□ -2.12
SF3A2Q15428 OR5AQ1P-201ENST00000527596 927 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 AP002963.1-201ENST00000530590 184 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.81□□□□□ -2.12
SF3A2Q15428 SNORA4-201ENST00000584302 138 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 DEFB131E-202ENST00000602581 683 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 AL451064.1-201ENST00000607718 471 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 AC126118.1-201ENST00000607744 628 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 RNU6-91P-201ENST00000607774 107 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 AC138749.5-201ENST00000611461 208 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
SF3A2Q15428 AC116165.2-201ENST00000616705 206 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 AC009509.4-201ENST00000619202 509 ntBASIC1.81□□□□□ -2.12
SF3A2Q15428 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
SF3A2Q15428 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.8□□□□□ -2.12
SF3A2Q15428 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SF3A2Q15428 RNU1-23P-201ENST00000363361 144 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 Y_RNA.359-201ENST00000365498 102 ntBASIC1.8□□□□□ -2.12
SF3A2Q15428 RNU6-395P-201ENST00000365662 106 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms