Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.83□□□□□ -2.12
SMARCB1Q12824 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.83□□□□□ -2.12
SMARCB1Q12824 AP002453.2-201ENST00000533503 320 ntBASIC1.83□□□□□ -2.12
SMARCB1Q12824 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.83□□□□□ -2.12
SMARCB1Q12824 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.83□□□□□ -2.12
SMARCB1Q12824 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.83□□□□□ -2.12
SMARCB1Q12824 AC012213.3-201ENST00000577199 777 ntBASIC1.83□□□□□ -2.12
SMARCB1Q12824 MIR4419B-201ENST00000577260 68 ntBASIC1.83□□□□□ -2.12
SMARCB1Q12824 AC098848.2-201ENST00000588023 330 ntBASIC1.83□□□□□ -2.12
SMARCB1Q12824 AC110760.3-201ENST00000598794 467 ntBASIC1.83□□□□□ -2.12
SMARCB1Q12824 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.83□□□□□ -2.12
SMARCB1Q12824 AC069294.1-201ENST00000608397 350 ntBASIC1.83□□□□□ -2.12
SMARCB1Q12824 AL158063.1-201ENST00000615349 536 ntBASIC1.83□□□□□ -2.12
SMARCB1Q12824 AC009233.1-201ENST00000616477 371 ntBASIC1.83□□□□□ -2.12
SMARCB1Q12824 AC136475.10-201ENST00000620253 385 ntBASIC1.83□□□□□ -2.12
SMARCB1Q12824 MIR412-201ENST00000362142 91 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 RNY1P12-201ENST00000364251 105 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 SNORA62.1-201ENST00000364287 154 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SMARCB1Q12824 SNORA75-201ENST00000384158 137 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 RNU6-72P-201ENST00000384285 79 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 RNU6-1179P-201ENST00000384667 107 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 RNA5SP489-201ENST00000410986 109 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 C1DP2-201ENST00000418167 426 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AL358453.1-201ENST00000422522 250 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 RPS3AP44-201ENST00000425466 790 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 GPR143P-201ENST00000434155 205 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 MTCO3P9-201ENST00000506989 781 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC008526.1-201ENST00000509149 338 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 MTND3P25-201ENST00000509243 135 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 RNA5SP458-201ENST00000516188 119 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 SNORD27.1-201ENST00000516319 72 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC118273.2-201ENST00000532092 465 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 OR5AL2P-201ENST00000532185 920 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 AP005136.1-201ENST00000579765 429 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 MIR3682-201ENST00000581338 84 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC040904.1-201ENST00000590850 223 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AL138889.2-201ENST00000603883 242 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AL355297.2-201ENST00000604792 129 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC138649.3-201ENST00000622154 254 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC078883.4-201ENST00000623218 367 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC097520.1-201ENST00000624435 385 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.82□□□□□ -2.12
SMARCB1Q12824 MIR3974-201ENST00000637126 96 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 MTND5P30-201ENST00000452896 1731 ntBASIC1.82□□□□□ -2.12
SMARCB1Q12824 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SMARCB1Q12824 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SMARCB1Q12824 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SMARCB1Q12824 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SMARCB1Q12824 Z75746.1-201ENST00000440243 2080 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 RNU6-550P-201ENST00000391057 101 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 U6atac.2-201ENST00000408644 118 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 RNU2-3P-201ENST00000410144 191 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 RNA5SP111-201ENST00000411386 101 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 RPL21P90-201ENST00000415692 466 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.81□□□□□ -2.12
SMARCB1Q12824 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.81□□□□□ -2.12
SMARCB1Q12824 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.81□□□□□ -2.12
SMARCB1Q12824 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.81□□□□□ -2.12
SMARCB1Q12824 AL627311.1-201ENST00000431514 115 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 AL358934.1-201ENST00000432346 324 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.81□□□□□ -2.12
SMARCB1Q12824 NDUFB1P2-201ENST00000449477 176 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.81□□□□□ -2.12
SMARCB1Q12824 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.81□□□□□ -2.12
SMARCB1Q12824 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.81□□□□□ -2.12
SMARCB1Q12824 Y_RNA.687-201ENST00000516558 91 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 Y_RNA.695-201ENST00000516715 107 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 RNU6-410P-201ENST00000517006 107 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.81□□□□□ -2.12
SMARCB1Q12824 AC079598.5-201ENST00000547460 117 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 MIR4528-201ENST00000577763 90 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.81□□□□□ -2.12
SMARCB1Q12824 AL590229.1-201ENST00000603497 542 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 AL670379.10-201ENST00000604330 253 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 AL670379.4-201ENST00000605279 254 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 AL670379.9-201ENST00000605428 253 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 AC087045.1-201ENST00000605856 382 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 U4atac.1-201ENST00000618345 95 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 AC099842.1-201ENST00000619919 596 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 Z69908.1-201ENST00000622603 247 ntBASIC1.81□□□□□ -2.12
SMARCB1Q12824 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SMARCB1Q12824 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SMARCB1Q12824 RBBP8P1-201ENST00000449447 1844 ntBASIC1.8□□□□□ -2.12
SMARCB1Q12824 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SMARCB1Q12824 RNU6-181P-201ENST00000363225 107 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms