Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.52□□□□□ -2.17
SYCNQ0VAF6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.52□□□□□ -2.17
SYCNQ0VAF6 RNU6-527P-201ENST00000363425 104 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 RNU6-266P-201ENST00000364225 107 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
SYCNQ0VAF6 RNU6-301P-201ENST00000384277 107 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 MIR561-201ENST00000385216 97 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 CBX3P9-201ENST00000402326 552 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 NDUFB4P4-201ENST00000404822 243 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 U3.40-201ENST00000408706 208 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 RNU4-55P-201ENST00000410731 137 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 SNORD56-201ENST00000413522 71 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 HMGN2P38-201ENST00000423806 265 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AL591043.1-201ENST00000432461 424 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC108938.1-201ENST00000451204 136 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.52□□□□□ -2.17
SYCNQ0VAF6 RPS3P1-201ENST00000456781 192 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.52□□□□□ -2.17
SYCNQ0VAF6 RPL30P12-201ENST00000474666 353 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 RPS27P21-201ENST00000486977 252 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC090255.1-201ENST00000495779 349 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 RN7SL636P-201ENST00000497504 294 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC079140.5-201ENST00000507882 310 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 RNU4-29P-201ENST00000515943 174 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 SNORA40.12-201ENST00000516329 111 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC109479.2-201ENST00000517842 174 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC118273.2-201ENST00000532092 465 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC022880.1-201ENST00000534017 973 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AP003034.1-201ENST00000534621 422 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC091135.1-201ENST00000585943 307 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC087683.1-201ENST00000591187 441 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC002044.1-201ENST00000606707 158 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC103810.6-201ENST00000606708 136 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SYCNQ0VAF6 AC012640.5-201ENST00000623897 319 ntBASIC1.52□□□□□ -2.17
SYCNQ0VAF6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
SYCNQ0VAF6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 MTND4P14-201ENST00000435799 1354 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 RNU1-91P-201ENST00000364746 163 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 SNORA25B-201ENST00000365507 128 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 RNU6-1274P-201ENST00000384557 107 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 EDDM3CP-201ENST00000415977 425 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 RPS15AP28-201ENST00000435088 386 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 MTND2P22-201ENST00000444325 1033 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 RPL39P29-201ENST00000447779 157 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC013470.1-201ENST00000453438 462 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 RNU7-167P-201ENST00000459160 62 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AL163973.1-201ENST00000484753 577 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 RNU6-377P-201ENST00000515965 102 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 RNU7-193P-201ENST00000516723 65 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 RN7SKP256-201ENST00000517201 314 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC034114.1-201ENST00000520293 285 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 COPS8P3-201ENST00000526024 482 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 MTND1P15-201ENST00000579262 949 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 MIR3941-201ENST00000582572 103 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 MIR5007-201ENST00000583098 95 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC004223.2-201ENST00000590309 544 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC012507.3-201ENST00000603556 477 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 APOOP1-201ENST00000604695 592 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC017083.3-201ENST00000609955 700 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 MIR6766-201ENST00000622641 72 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AC097372.5-201ENST00000623665 376 ntBASIC1.51□□□□□ -2.17
SYCNQ0VAF6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
SYCNQ0VAF6 AL136360.1-201ENST00000503377 1900 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.5□□□□□ -2.17
SYCNQ0VAF6 MTND5P26-201ENST00000426018 1752 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 RNU6-525P-201ENST00000363685 104 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 Y_RNA.255-201ENST00000364581 97 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 RNU6-336P-201ENST00000364891 107 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 Y_RNA.381-201ENST00000365666 102 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 RNU6-1042P-201ENST00000384204 107 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 RNU6-1222P-201ENST00000384615 107 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYCNQ0VAF6 SNORD23.1-201ENST00000408212 104 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 RNU2-66P-201ENST00000410650 161 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 RNA5SP270-201ENST00000411361 118 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 AL663109.1-201ENST00000411498 844 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.5□□□□□ -2.17
SYCNQ0VAF6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.5□□□□□ -2.17
SYCNQ0VAF6 AL117339.3-201ENST00000418733 162 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 AC010975.2-201ENST00000427781 588 ntBASIC1.5□□□□□ -2.17
SYCNQ0VAF6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms