| PAX8 | Q06710 | ELF1-201 | ENST00000239882 | 3566 nt | APPRIS P1 TSL 1 (best) BASIC | 2.28 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | TANK-201 | ENST00000259075 | 2152 nt | APPRIS P1 TSL 1 (best) BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC099654.7-201 | ENST00000635788 | 2127 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | SNX10-209 | ENST00000619420 | 2361 nt | APPRIS ALT1 TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | FGF14-201 | ENST00000376131 | 12882 nt | TSL 1 (best) BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | OLFM3-206 | ENST00000536598 | 2801 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-562P-201 | ENST00000362731 | 107 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNA5SP139-201 | ENST00000364340 | 117 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU1-112P-201 | ENST00000364401 | 164 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | FAM206A-202 | ENST00000374624 | 499 nt | TSL 3 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-128P-201 | ENST00000383976 | 107 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-72P-201 | ENST00000384285 | 79 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MIR34A-201 | ENST00000385130 | 110 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU4-14P-201 | ENST00000410858 | 122 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC009411.1-202 | ENST00000412424 | 548 nt | TSL 4 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL355388.1-201 | ENST00000415726 | 401 nt | TSL 2 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RPS3AP52-201 | ENST00000435639 | 297 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | KRTAP19-11P-201 | ENST00000439851 | 104 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | U91324.1-201 | ENST00000442864 | 447 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL138921.2-201 | ENST00000443919 | 578 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | Z96811.1-201 | ENST00000445880 | 108 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | LINC01710-201 | ENST00000446002 | 390 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | LINC01162-201 | ENST00000447262 | 447 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MTND1P17-201 | ENST00000448961 | 204 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC114501.3-201 | ENST00000453648 | 164 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL627309.4-201 | ENST00000496488 | 457 nt | TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MTND5P5-201 | ENST00000503764 | 376 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL359273.1-202 | ENST00000505585 | 905 nt | TSL 1 (best) BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL355375.2-201 | ENST00000574825 | 175 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MIR4790-201 | ENST00000577799 | 79 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC011825.2-201 | ENST00000583138 | 553 nt | TSL 4 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MIR4795-201 | ENST00000584182 | 89 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC135178.3-204 | ENST00000585181 | 451 nt | TSL 2 BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | POLR3GP2-201 | ENST00000588366 | 668 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC020895.1-201 | ENST00000595362 | 272 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | ELOCP5-201 | ENST00000604924 | 333 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC064836.2-201 | ENST00000609491 | 462 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC107871.2-201 | ENST00000612894 | 502 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC010378.1-201 | ENST00000619270 | 362 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | LTN1-201 | ENST00000361371 | 7685 nt | APPRIS P1 TSL 1 (best) BASIC | 2.27 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MAPK10-266 | ENST00000641066 | 6555 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | OGN-202 | ENST00000375561 | 2743 nt | APPRIS P1 TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | EVI2A-201 | ENST00000247270 | 1860 nt | APPRIS P3 TSL 2 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | CDK1-209 | ENST00000614696 | 1884 nt | TSL 5 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | FOXP2-211 | ENST00000408937 | 6443 nt | TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RBBP8-202 | ENST00000360790 | 2962 nt | TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | OR13G1-202 | ENST00000642119 | 2568 nt | APPRIS P1 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC010680.1-201 | ENST00000590024 | 3590 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC138915.1-201 | ENST00000565427 | 1685 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AGR3-201 | ENST00000310398 | 749 nt | APPRIS P1 TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | Y_RNA.58-201 | ENST00000362807 | 102 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | Y_RNA.154-201 | ENST00000363624 | 102 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNY3P1-201 | ENST00000365085 | 102 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNY3-201 | ENST00000365484 | 102 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-1329P-201 | ENST00000365664 | 107 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | TSACC-205 | ENST00000368255 | 751 nt | APPRIS P1 TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | Y_RNA.490-201 | ENST00000384413 | 102 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-95P-201 | ENST00000384697 | 107 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | SNORA26.7-201 | ENST00000391288 | 122 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC023141.4-201 | ENST00000412031 | 328 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | SNORD56-201 | ENST00000413522 | 71 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL356277.2-201 | ENST00000421318 | 441 nt | TSL 2 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | UBBP3-201 | ENST00000445497 | 241 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC004936.1-201 | ENST00000451755 | 361 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RPL23AP45-201 | ENST00000476406 | 468 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MTCO1P29-201 | ENST00000496868 | 288 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC034223.1-201 | ENST00000511054 | 599 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MDM2-221 | ENST00000517852 | 393 nt | TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC090568.2-205 | ENST00000518631 | 576 nt | TSL 4 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC105999.1-201 | ENST00000518722 | 473 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | LINC02055-204 | ENST00000521034 | 432 nt | TSL 5 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC104576.1-201 | ENST00000524225 | 88 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC026371.1-201 | ENST00000551867 | 419 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MTCO3P13-201 | ENST00000577757 | 781 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC091043.1-201 | ENST00000579830 | 453 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC100830.2-201 | ENST00000581636 | 240 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | ZNF861P-201 | ENST00000588126 | 639 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | OR1M4P-201 | ENST00000589199 | 287 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MIR6134-201 | ENST00000617606 | 109 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | ABCA9-AS1-203 | ENST00000627596 | 426 nt | TSL 5 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MIR1302-1-201 | ENST00000637932 | 143 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | FAM46D-201 | ENST00000308293 | 3011 nt | APPRIS P1 TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | SIRT1-202 | ENST00000403579 | 3333 nt | TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | LRIF1-203 | ENST00000494675 | 1912 nt | APPRIS ALT2 TSL 2 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AGTR1-204 | ENST00000418473 | 2071 nt | TSL 5 BASIC | 2.26 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MTND4P29-201 | ENST00000503122 | 1372 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RGPD6-201 | ENST00000329516 | 7165 nt | APPRIS P1 TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | C1orf141-203 | ENST00000371007 | 2153 nt | APPRIS P3 TSL 5 BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | CHD9-203 | ENST00000447540 | 11509 nt | TSL 5 BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | MIR26A1-201 | ENST00000362205 | 77 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | U8.9-201 | ENST00000365667 | 134 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU6-214P-201 | ENST00000384130 | 107 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RPL21P75-201 | ENST00000396599 | 483 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RPL21P28-201 | ENST00000401418 | 483 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | SNORD88.1-201 | ENST00000408684 | 91 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | RNU2-52P-201 | ENST00000410680 | 190 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC074085.1-201 | ENST00000413598 | 418 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AC062039.1-201 | ENST00000414394 | 565 nt | TSL 2 BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | AL451074.5-201 | ENST00000415894 | 435 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| PAX8 | Q06710 | NCOR1P3-201 | ENST00000420479 | 303 nt | BASIC | 2.25 | □□□□□ -2.05 | | |