Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 PRELID2P1-201ENST00000552837 301 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 AC024909.2-201ENST00000553035 286 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.3□□□□□ -2.04
GABPAQ06546 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 AC023824.2-201ENST00000566185 400 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.3□□□□□ -2.04
GABPAQ06546 MTCYBP33-201ENST00000575007 1130 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.3□□□□□ -2.04
GABPAQ06546 AC080013.6-201ENST00000606185 215 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 AC103591.3-201ENST00000608684 209 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 AL031601.2-202ENST00000622650 282 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.3□□□□□ -2.04
GABPAQ06546 MTND4P14-201ENST00000435799 1354 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
GABPAQ06546 Z82209.1-201ENST00000422141 2135 ntBASIC2.3□□□□□ -2.04
GABPAQ06546 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
GABPAQ06546 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
GABPAQ06546 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
GABPAQ06546 RBBP8P1-201ENST00000449447 1844 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 Y_RNA.381-201ENST00000365666 102 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 RNU6-393P-201ENST00000384475 107 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 SNORD116-20-201ENST00000384529 92 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 RAP1BP3-201ENST00000407180 549 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 RNU6-607P-201ENST00000411283 108 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 AC138623.1-201ENST00000418060 216 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 MTCYBP8-201ENST00000422855 651 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 MTCO2P19-201ENST00000427513 598 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 HMGB1P31-201ENST00000437242 427 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 RPL7P12-201ENST00000446719 750 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 AL021397.1-201ENST00000451806 248 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 SNRPFP3-201ENST00000457792 225 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 RNU7-26P-201ENST00000458980 63 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 SCARNA18-201ENST00000459004 134 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.29□□□□□ -2.04
GABPAQ06546 HMGB1P29-201ENST00000505659 499 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.29□□□□□ -2.04
GABPAQ06546 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.29□□□□□ -2.04
GABPAQ06546 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.29□□□□□ -2.04
GABPAQ06546 CR383656.8-201ENST00000549046 145 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 MIR5571-201ENST00000577998 113 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 AC012507.3-201ENST00000603556 477 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 NDUFA8P1-201ENST00000605525 367 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 AC096772.1-201ENST00000609146 564 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.29□□□□□ -2.04
GABPAQ06546 AL354950.2-201ENST00000617939 290 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
GABPAQ06546 SCARNA4-202ENST00000625402 129 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 MIR3529-201ENST00000637713 78 ntBASIC2.29□□□□□ -2.04
GABPAQ06546 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
GABPAQ06546 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
GABPAQ06546 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
GABPAQ06546 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
GABPAQ06546 RNU6-1303P-201ENST00000364841 107 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 RNU6-996P-201ENST00000365438 107 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 RNU6-259P-201ENST00000383999 107 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 Y_RNA.559-201ENST00000384686 107 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 U6atac.2-201ENST00000408644 118 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 RNU2-3P-201ENST00000410144 191 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 RNU2-66P-201ENST00000410650 161 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 CYCSP33-201ENST00000414485 327 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 UBE2V1P10-201ENST00000414685 269 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AL353193.1-201ENST00000421444 268 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AL669831.1-202ENST00000428504 417 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AL365400.1-201ENST00000431854 640 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 GTF2IP13-201ENST00000438487 386 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 RPL23AP7-203ENST00000449021 469 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AL122001.1-201ENST00000457027 370 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AC006026.2-201ENST00000457376 180 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.28□□□□□ -2.04
GABPAQ06546 MTCO3P9-201ENST00000506989 781 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AC105313.1-201ENST00000509121 353 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 MTCO3P7-201ENST00000510008 774 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AC091133.4-201ENST00000511142 308 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.28□□□□□ -2.04
GABPAQ06546 LRRC34P2-201ENST00000514850 553 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 RNU6-991P-201ENST00000516168 107 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 RN7SKP219-201ENST00000516825 296 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.28□□□□□ -2.04
GABPAQ06546 AP005435.4-201ENST00000529514 284 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.28□□□□□ -2.04
GABPAQ06546 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AC105245.1-201ENST00000581934 244 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 RPS15AP11-201ENST00000594193 385 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 BNIP3P30-201ENST00000601184 574 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 RNU6-91P-201ENST00000607774 107 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AL158209.2-201ENST00000619266 216 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 AC005609.4-201ENST00000625071 447 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
GABPAQ06546 MTND5P26-201ENST00000426018 1752 ntBASIC2.28□□□□□ -2.04
GABPAQ06546 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
GABPAQ06546 SNORD114-19-201ENST00000363072 75 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 Y_RNA.409-201ENST00000383990 98 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 RNU6-434P-201ENST00000384376 107 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 RNU6-843P-201ENST00000384454 104 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 RNU6-903P-201ENST00000391270 109 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 AC019129.1-201ENST00000403786 261 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.27□□□□□ -2.05
GABPAQ06546 PRPS1P1-201ENST00000445305 876 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 AC025033.1-201ENST00000463883 194 ntBASIC2.27□□□□□ -2.05
GABPAQ06546 GMFBP1-201ENST00000467831 427 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms