Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGCS1Q01581 Y_RNA.688-201ENST00000516565 95 ntBASIC1.75□□□□□ -2.13
HMGCS1Q01581 RNU6-430P-201ENST00000517078 107 ntBASIC1.75□□□□□ -2.13
HMGCS1Q01581 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.75□□□□□ -2.13
HMGCS1Q01581 MIR4419B-201ENST00000577260 68 ntBASIC1.75□□□□□ -2.13
HMGCS1Q01581 MIR4287-201ENST00000579398 78 ntBASIC1.75□□□□□ -2.13
HMGCS1Q01581 MIR5692A1-201ENST00000580523 69 ntBASIC1.75□□□□□ -2.13
HMGCS1Q01581 BNIP3P30-201ENST00000601184 574 ntBASIC1.75□□□□□ -2.13
HMGCS1Q01581 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.75□□□□□ -2.13
HMGCS1Q01581 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.75□□□□□ -2.13
HMGCS1Q01581 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGCS1Q01581 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGCS1Q01581 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
HMGCS1Q01581 AL390237.1-201ENST00000404226 1415 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC138393.1-203ENST00000327086 343 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 RNU2-3P-201ENST00000410144 191 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 RNU2-9P-201ENST00000410194 145 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.74□□□□□ -2.13
HMGCS1Q01581 MTCO2P11-201ENST00000431069 680 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 HMGN2P3-201ENST00000433603 273 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 HMGN2P5-201ENST00000436882 273 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 MTCO2P16-201ENST00000436962 677 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.74□□□□□ -2.13
HMGCS1Q01581 PMCHL2-203ENST00000457791 237 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 RNU7-182P-201ENST00000459009 62 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC006512.1-201ENST00000468816 291 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC018437.1-201ENST00000492214 406 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 HMGB1P30-201ENST00000492455 606 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 RPS29P11-201ENST00000496507 171 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.74□□□□□ -2.13
HMGCS1Q01581 MTCO3P9-201ENST00000506989 781 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.74□□□□□ -2.13
HMGCS1Q01581 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AP004607.1-201ENST00000524456 203 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 BNIP3P6-201ENST00000549284 499 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.74□□□□□ -2.13
HMGCS1Q01581 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC010620.1-201ENST00000601088 1102 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC025449.1-201ENST00000603896 529 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC093788.1-201ENST00000609356 927 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 AC072046.2-201ENST00000618366 268 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 SEPT14P19-203ENST00000633205 211 ntBASIC1.74□□□□□ -2.13
HMGCS1Q01581 RNU6-715P-201ENST00000365204 103 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 RNU6-843P-201ENST00000384454 104 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 RNU6-45P-201ENST00000384471 107 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 SNORD116-20-201ENST00000384529 92 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 Y_RNA.553-201ENST00000384670 102 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 CYCSP33-201ENST00000414485 327 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 UBE2V1P10-201ENST00000414685 269 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGCS1Q01581 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGCS1Q01581 AIMP1P2-201ENST00000425294 312 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AL669831.1-202ENST00000428504 417 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGCS1Q01581 GTF2IP13-201ENST00000438487 386 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.73□□□□□ -2.13
HMGCS1Q01581 AP001025.1-201ENST00000486139 332 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC010424.1-201ENST00000506336 297 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGCS1Q01581 SNORA43.2-201ENST00000516652 128 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 RNU6-1178P-201ENST00000516674 107 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 RNA5SP503-201ENST00000517047 117 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 SNORA31.23-201ENST00000517219 133 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGCS1Q01581 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGCS1Q01581 CR383656.8-201ENST00000549046 145 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 SUB1P2-201ENST00000556401 297 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC110588.1-201ENST00000559699 137 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC136619.2-201ENST00000563361 631 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC006362.1-201ENST00000567392 174 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AL158827.2-201ENST00000602494 330 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AL355297.2-201ENST00000604792 129 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 RNU6-91P-201ENST00000607774 107 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 MIR5739-201ENST00000619803 80 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC009161.2-201ENST00000624626 138 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.73□□□□□ -2.13
HMGCS1Q01581 AL691447.3-201ENST00000635020 330 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 AC131280.1-202ENST00000624067 4211 ntBASIC1.73□□□□□ -2.13
HMGCS1Q01581 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMGCS1Q01581 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
HMGCS1Q01581 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
HMGCS1Q01581 Y_RNA.77-201ENST00000362962 107 ntBASIC1.72□□□□□ -2.13
HMGCS1Q01581 RNU6-529P-201ENST00000363383 104 ntBASIC1.72□□□□□ -2.13
HMGCS1Q01581 Y_RNA.159-201ENST00000363674 87 ntBASIC1.72□□□□□ -2.13
HMGCS1Q01581 RNU6-1303P-201ENST00000364841 107 ntBASIC1.72□□□□□ -2.13
HMGCS1Q01581 Y_RNA.359-201ENST00000365498 102 ntBASIC1.72□□□□□ -2.13
HMGCS1Q01581 RNU4-48P-201ENST00000365559 182 ntBASIC1.72□□□□□ -2.13
HMGCS1Q01581 RNU6-1032P-201ENST00000384100 107 ntBASIC1.72□□□□□ -2.13
HMGCS1Q01581 MIR9-3-201ENST00000385084 90 ntBASIC1.72□□□□□ -2.13
HMGCS1Q01581 MIR676-201ENST00000390702 67 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms