Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MIR627-201ENST00000384979 97 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 MIR181B1-201ENST00000385240 110 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 RNU2-23P-201ENST00000410545 195 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 RNU6-325P-201ENST00000411132 105 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.38□□□□□ -2.03
CX3CL1P78423 PDCL2P1-201ENST00000419302 352 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 AC098614.3-201ENST00000438957 440 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 MTND3P10-201ENST00000450967 341 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.38□□□□□ -2.03
CX3CL1P78423 PPP1R2P5-201ENST00000457256 603 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 RPL30P12-201ENST00000474666 353 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 AC096576.1-201ENST00000489014 359 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 RN7SKP57-201ENST00000517248 293 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.38□□□□□ -2.03
CX3CL1P78423 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.38□□□□□ -2.03
CX3CL1P78423 AP005639.2-201ENST00000527592 928 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 AP002404.1-201ENST00000532005 451 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.38□□□□□ -2.03
CX3CL1P78423 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CX3CL1P78423 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.38□□□□□ -2.03
CX3CL1P78423 AC105137.2-201ENST00000569073 466 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.38□□□□□ -2.03
CX3CL1P78423 AC138761.3-201ENST00000579993 334 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 MIR548S-201ENST00000581352 82 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 AC022306.2-201ENST00000617563 647 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 MIR8057-201ENST00000620957 69 ntBASIC2.38□□□□□ -2.03
CX3CL1P78423 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.38□□□□□ -2.03
CX3CL1P78423 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CX3CL1P78423 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.38□□□□□ -2.03
CX3CL1P78423 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CX3CL1P78423 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.38□□□□□ -2.03
CX3CL1P78423 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CX3CL1P78423 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
CX3CL1P78423 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.37□□□□□ -2.03
CX3CL1P78423 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CX3CL1P78423 SNORA72.1-201ENST00000363485 129 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 SNORA54-201ENST00000384281 123 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 RNY3P14-201ENST00000384309 102 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 MIR544A-201ENST00000384855 91 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 MIR218-1-201ENST00000384999 110 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 AL030996.1-201ENST00000411430 235 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 AC124916.1-201ENST00000444020 547 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.37□□□□□ -2.03
CX3CL1P78423 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.37□□□□□ -2.03
CX3CL1P78423 AC130509.1-201ENST00000464158 433 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 AC117440.1-201ENST00000474107 571 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 HMGN1P12-201ENST00000499125 195 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 AC023141.11-201ENST00000508864 202 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.37□□□□□ -2.03
CX3CL1P78423 AC046134.1-201ENST00000514454 666 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 RNU6-566P-201ENST00000516790 107 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 SCARNA3-201ENST00000517097 143 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.37□□□□□ -2.03
CX3CL1P78423 AL121579.1-201ENST00000555129 305 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 AC005730.3-201ENST00000583067 366 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.37□□□□□ -2.03
CX3CL1P78423 AC073410.2-201ENST00000603240 332 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 AL022345.1-201ENST00000607292 135 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 AC104237.2-201ENST00000612456 443 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 AL442067.2-201ENST00000614033 363 ntBASIC2.37□□□□□ -2.03
CX3CL1P78423 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.37□□□□□ -2.03
CX3CL1P78423 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CX3CL1P78423 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CX3CL1P78423 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.36□□□□□ -2.03
CX3CL1P78423 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
CX3CL1P78423 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.36□□□□□ -2.03
CX3CL1P78423 RPL9P7-201ENST00000330965 580 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 RNU6-212P-201ENST00000362642 104 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 Y_RNA.40-201ENST00000362645 93 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 Y_RNA.166-201ENST00000363730 102 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 Y_RNA.184-201ENST00000363884 108 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 RNU6-1317P-201ENST00000364582 104 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 RNU1-57P-201ENST00000384491 166 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 MIR186-201ENST00000384988 86 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 AL590004.2-201ENST00000404787 371 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 AL138885.1-201ENST00000405921 675 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 RN7SKP32-201ENST00000410167 303 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.36□□□□□ -2.03
CX3CL1P78423 AL451074.5-201ENST00000415894 435 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 BX276092.3-201ENST00000424182 230 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 AC006946.1-201ENST00000429106 328 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 AC022018.1-201ENST00000430685 241 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.36□□□□□ -2.03
CX3CL1P78423 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.36□□□□□ -2.03
CX3CL1P78423 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.36□□□□□ -2.03
CX3CL1P78423 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.36□□□□□ -2.03
CX3CL1P78423 RPL39P29-201ENST00000447779 157 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 MTND1P17-201ENST00000448961 204 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.36□□□□□ -2.03
CX3CL1P78423 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.36□□□□□ -2.03
CX3CL1P78423 MTND1P11-201ENST00000456661 876 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 snoU13.22-201ENST00000459428 104 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 MTCO1P29-201ENST00000496868 288 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.36□□□□□ -2.03
CX3CL1P78423 RNU7-30P-201ENST00000516835 62 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 RNU6-612P-201ENST00000516909 102 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 RNA5SP454-201ENST00000517231 127 ntBASIC2.36□□□□□ -2.03
CX3CL1P78423 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.36□□□□□ -2.03
CX3CL1P78423 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.36□□□□□ -2.03
CX3CL1P78423 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms