Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC024581.2-201ENST00000619986 252 ntBASIC2.97□□□□□ -1.93
RAE1P78406 AC241585.2-209ENST00000638217 143 ntBASIC2.97□□□□□ -1.93
RAE1P78406 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RAE1P78406 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
RAE1P78406 AC004944.1-201ENST00000517807 3059 ntBASIC2.97□□□□□ -1.93
RAE1P78406 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
RAE1P78406 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
RAE1P78406 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RAE1P78406 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.96□□□□□ -1.93
RAE1P78406 AC093831.2-201ENST00000624393 3427 ntBASIC2.96□□□□□ -1.94
RAE1P78406 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RAE1P78406 Y_RNA.202-201ENST00000364083 110 ntBASIC2.96□□□□□ -1.94
RAE1P78406 Y_RNA.252-201ENST00000364556 101 ntBASIC2.96□□□□□ -1.94
RAE1P78406 SNORA7.4-201ENST00000384249 137 ntBASIC2.96□□□□□ -1.94
RAE1P78406 RNU6-843P-201ENST00000384454 104 ntBASIC2.96□□□□□ -1.94
RAE1P78406 AC096664.2-201ENST00000411843 406 ntBASIC2.96□□□□□ -1.94
RAE1P78406 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.96□□□□□ -1.94
RAE1P78406 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.96□□□□□ -1.94
RAE1P78406 PMCHL1-202ENST00000423102 261 ntBASIC2.96□□□□□ -1.94
RAE1P78406 AC018865.2-201ENST00000423631 129 ntBASIC2.96□□□□□ -1.94
RAE1P78406 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.96□□□□□ -1.94
RAE1P78406 AL365496.1-201ENST00000426885 215 ntBASIC2.96□□□□□ -1.94
RAE1P78406 AC243964.1-201ENST00000441814 261 ntBASIC2.96□□□□□ -1.94
RAE1P78406 AC007969.2-201ENST00000441891 191 ntBASIC2.96□□□□□ -1.94
RAE1P78406 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.96□□□□□ -1.94
RAE1P78406 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RAE1P78406 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.96□□□□□ -1.94
RAE1P78406 RN7SL75P-201ENST00000461926 281 ntBASIC2.96□□□□□ -1.94
RAE1P78406 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.96□□□□□ -1.94
RAE1P78406 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.96□□□□□ -1.94
RAE1P78406 FO393415.2-201ENST00000480085 343 ntBASIC2.96□□□□□ -1.94
RAE1P78406 RN7SL20P-201ENST00000488827 297 ntBASIC2.96□□□□□ -1.94
RAE1P78406 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.96□□□□□ -1.94
RAE1P78406 AC022447.4-201ENST00000504053 364 ntBASIC2.96□□□□□ -1.94
RAE1P78406 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.96□□□□□ -1.94
RAE1P78406 RNU5F-8P-201ENST00000515941 111 ntBASIC2.96□□□□□ -1.94
RAE1P78406 SNORA31.23-201ENST00000517219 133 ntBASIC2.96□□□□□ -1.94
RAE1P78406 IGHV3-76-201ENST00000522465 295 ntBASIC2.96□□□□□ -1.94
RAE1P78406 CBX3P8-201ENST00000532412 525 ntBASIC2.96□□□□□ -1.94
RAE1P78406 AC091152.3-201ENST00000604227 325 ntBASIC2.96□□□□□ -1.94
RAE1P78406 AC019159.1-201ENST00000605094 187 ntBASIC2.96□□□□□ -1.94
RAE1P78406 AC005014.2-201ENST00000607795 599 ntBASIC2.96□□□□□ -1.94
RAE1P78406 AC009318.2-201ENST00000610917 651 ntBASIC2.96□□□□□ -1.94
RAE1P78406 AC018692.3-201ENST00000623929 123 ntBASIC2.96□□□□□ -1.94
RAE1P78406 MTND5P9-201ENST00000503854 1755 ntBASIC2.96□□□□□ -1.94
RAE1P78406 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
RAE1P78406 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RAE1P78406 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RAE1P78406 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RAE1P78406 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.96□□□□□ -1.94
RAE1P78406 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RAE1P78406 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.95□□□□□ -1.94
RAE1P78406 SNORD56.1-201ENST00000362913 68 ntBASIC2.95□□□□□ -1.94
RAE1P78406 Y_RNA.216-201ENST00000364205 93 ntBASIC2.95□□□□□ -1.94
RAE1P78406 RNU6-784P-201ENST00000384330 106 ntBASIC2.95□□□□□ -1.94
RAE1P78406 RNU6-692P-201ENST00000384496 107 ntBASIC2.95□□□□□ -1.94
RAE1P78406 RNU6-748P-201ENST00000384648 107 ntBASIC2.95□□□□□ -1.94
RAE1P78406 RNU6-750P-201ENST00000390946 107 ntBASIC2.95□□□□□ -1.94
RAE1P78406 BTF3L4P2-201ENST00000392798 346 ntBASIC2.95□□□□□ -1.94
RAE1P78406 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
RAE1P78406 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.95□□□□□ -1.94
RAE1P78406 PTGES3P4-201ENST00000426243 356 ntBASIC2.95□□□□□ -1.94
RAE1P78406 AL035666.1-201ENST00000446195 348 ntBASIC2.95□□□□□ -1.94
RAE1P78406 AC079354.2-201ENST00000453523 154 ntBASIC2.95□□□□□ -1.94
RAE1P78406 RN7SL863P-201ENST00000462370 296 ntBASIC2.95□□□□□ -1.94
RAE1P78406 AC109925.1-201ENST00000478069 331 ntBASIC2.95□□□□□ -1.94
RAE1P78406 AL163540.1-201ENST00000485382 386 ntBASIC2.95□□□□□ -1.94
RAE1P78406 AC097462.2-201ENST00000504623 481 ntBASIC2.95□□□□□ -1.94
RAE1P78406 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.95□□□□□ -1.94
RAE1P78406 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.95□□□□□ -1.94
RAE1P78406 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.95□□□□□ -1.94
RAE1P78406 RNU6-264P-201ENST00000517134 104 ntBASIC2.95□□□□□ -1.94
RAE1P78406 CKS1BP7-201ENST00000522230 235 ntBASIC2.95□□□□□ -1.94
RAE1P78406 AP000889.1-201ENST00000530968 660 ntBASIC2.95□□□□□ -1.94
RAE1P78406 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.95□□□□□ -1.94
RAE1P78406 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.95□□□□□ -1.94
RAE1P78406 SUB1P3-201ENST00000564581 315 ntBASIC2.95□□□□□ -1.94
RAE1P78406 MIR5696-201ENST00000578474 85 ntBASIC2.95□□□□□ -1.94
RAE1P78406 UBL5P2-201ENST00000583788 219 ntBASIC2.95□□□□□ -1.94
RAE1P78406 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.95□□□□□ -1.94
RAE1P78406 AL158827.2-201ENST00000602494 330 ntBASIC2.95□□□□□ -1.94
RAE1P78406 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.95□□□□□ -1.94
RAE1P78406 HMGB1P24-202ENST00000615653 685 ntBASIC2.95□□□□□ -1.94
RAE1P78406 MIR7112-201ENST00000616126 65 ntBASIC2.95□□□□□ -1.94
RAE1P78406 AL691447.3-201ENST00000635020 330 ntBASIC2.95□□□□□ -1.94
RAE1P78406 ZNF299P-201ENST00000406845 1804 ntBASIC2.95□□□□□ -1.94
RAE1P78406 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
RAE1P78406 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RAE1P78406 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
RAE1P78406 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
RAE1P78406 AC008669.1-201ENST00000565823 2178 ntBASIC2.94□□□□□ -1.94
RAE1P78406 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RAE1P78406 AC010889.1-201ENST00000566193 2666 ntBASIC2.94□□□□□ -1.94
RAE1P78406 AC110774.1-201ENST00000623567 2018 ntBASIC2.94□□□□□ -1.94
RAE1P78406 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.94□□□□□ -1.94
RAE1P78406 Y_RNA.28-201ENST00000362554 111 ntBASIC2.94□□□□□ -1.94
RAE1P78406 Y_RNA.31-201ENST00000362574 102 ntBASIC2.94□□□□□ -1.94
RAE1P78406 SNORD50.1-201ENST00000362987 71 ntBASIC2.94□□□□□ -1.94
RAE1P78406 RNA5SP267-201ENST00000364893 126 ntBASIC2.94□□□□□ -1.94
RAE1P78406 SNORD67-201ENST00000390833 111 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms