Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL158827.2-201ENST00000602494 330 ntBASIC2.14□□□□□ -2.07
SRP54P61011 AL160394.1-201ENST00000624765 724 ntBASIC2.14□□□□□ -2.07
SRP54P61011 AL691447.3-201ENST00000635020 330 ntBASIC2.14□□□□□ -2.07
SRP54P61011 MIR219B-201ENST00000637023 88 ntBASIC2.14□□□□□ -2.07
SRP54P61011 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
SRP54P61011 KPNA2P1-201ENST00000458289 1591 ntBASIC2.14□□□□□ -2.07
SRP54P61011 RNU6-212P-201ENST00000362642 104 ntBASIC2.13□□□□□ -2.07
SRP54P61011 Y_RNA.40-201ENST00000362645 93 ntBASIC2.13□□□□□ -2.07
SRP54P61011 SNORD114-1-201ENST00000362705 72 ntBASIC2.13□□□□□ -2.07
SRP54P61011 AL079342.1-201ENST00000401460 267 ntBASIC2.13□□□□□ -2.07
SRP54P61011 AC132479.1-201ENST00000449160 144 ntBASIC2.13□□□□□ -2.07
SRP54P61011 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.13□□□□□ -2.07
SRP54P61011 RN7SKP256-201ENST00000517201 314 ntBASIC2.13□□□□□ -2.07
SRP54P61011 HSPE1P18-201ENST00000517602 280 ntBASIC2.13□□□□□ -2.07
SRP54P61011 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.13□□□□□ -2.07
SRP54P61011 NDUFA5P6-201ENST00000542110 379 ntBASIC2.13□□□□□ -2.07
SRP54P61011 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.13□□□□□ -2.07
SRP54P61011 MTND3P12-201ENST00000559068 328 ntBASIC2.13□□□□□ -2.07
SRP54P61011 AL391840.1-201ENST00000571144 367 ntBASIC2.13□□□□□ -2.07
SRP54P61011 AC078899.2-201ENST00000595282 212 ntBASIC2.13□□□□□ -2.07
SRP54P61011 AL136363.2-201ENST00000604173 851 ntBASIC2.13□□□□□ -2.07
SRP54P61011 AL670379.2-201ENST00000604983 252 ntBASIC2.13□□□□□ -2.07
SRP54P61011 MIR3974-201ENST00000637126 96 ntBASIC2.13□□□□□ -2.07
SRP54P61011 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.12□□□□□ -2.07
SRP54P61011 Y_RNA.324-201ENST00000365165 102 ntBASIC2.12□□□□□ -2.07
SRP54P61011 MIR504-201ENST00000385065 83 ntBASIC2.12□□□□□ -2.07
SRP54P61011 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SRP54P61011 AL023284.1-201ENST00000403956 276 ntBASIC2.12□□□□□ -2.07
SRP54P61011 AC090960.1-201ENST00000421072 306 ntBASIC2.12□□□□□ -2.07
SRP54P61011 AL591043.1-201ENST00000432461 424 ntBASIC2.12□□□□□ -2.07
SRP54P61011 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SRP54P61011 USP9YP29-201ENST00000445112 563 ntBASIC2.12□□□□□ -2.07
SRP54P61011 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.12□□□□□ -2.07
SRP54P61011 AC079140.5-201ENST00000507882 310 ntBASIC2.12□□□□□ -2.07
SRP54P61011 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.12□□□□□ -2.07
SRP54P61011 SNORA4.4-201ENST00000515921 135 ntBASIC2.12□□□□□ -2.07
SRP54P61011 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC2.12□□□□□ -2.07
SRP54P61011 SUB1P2-201ENST00000556401 297 ntBASIC2.12□□□□□ -2.07
SRP54P61011 MIR4529-201ENST00000578110 78 ntBASIC2.12□□□□□ -2.07
SRP54P61011 AL159153.1-201ENST00000619688 317 ntBASIC2.12□□□□□ -2.07
SRP54P61011 AC098657.3-201ENST00000620434 263 ntBASIC2.12□□□□□ -2.07
SRP54P61011 AC022418.1-201ENST00000624118 445 ntBASIC2.12□□□□□ -2.07
SRP54P61011 U4.7-201ENST00000638126 106 ntBASIC2.12□□□□□ -2.07
SRP54P61011 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SRP54P61011 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.12□□□□□ -2.07
SRP54P61011 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.12□□□□□ -2.07
SRP54P61011 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SRP54P61011 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.11□□□□□ -2.07
SRP54P61011 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SRP54P61011 RNU6-348P-201ENST00000384386 107 ntBASIC2.11□□□□□ -2.07
SRP54P61011 SNORA48.3-201ENST00000391081 134 ntBASIC2.11□□□□□ -2.07
SRP54P61011 AF228730.1-201ENST00000397972 663 ntBASIC2.11□□□□□ -2.07
SRP54P61011 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.11□□□□□ -2.07
SRP54P61011 MTCO2P11-201ENST00000431069 680 ntBASIC2.11□□□□□ -2.07
SRP54P61011 AC007969.2-201ENST00000441891 191 ntBASIC2.11□□□□□ -2.07
SRP54P61011 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.11□□□□□ -2.07
SRP54P61011 FDX1P2-201ENST00000450769 375 ntBASIC2.11□□□□□ -2.07
SRP54P61011 AC055731.1-201ENST00000474387 401 ntBASIC2.11□□□□□ -2.07
SRP54P61011 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.11□□□□□ -2.07
SRP54P61011 RNU2-19P-201ENST00000517288 84 ntBASIC2.11□□□□□ -2.07
SRP54P61011 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.11□□□□□ -2.07
SRP54P61011 AC233702.2-202ENST00000562547 291 ntBASIC2.11□□□□□ -2.07
SRP54P61011 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.11□□□□□ -2.07
SRP54P61011 ELOCP5-201ENST00000604924 333 ntBASIC2.11□□□□□ -2.07
SRP54P61011 AP001596.2-201ENST00000608410 312 ntBASIC2.11□□□□□ -2.07
SRP54P61011 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
SRP54P61011 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SRP54P61011 MIR7843-201ENST00000622274 79 ntBASIC2.11□□□□□ -2.07
SRP54P61011 Z69908.1-201ENST00000622603 247 ntBASIC2.11□□□□□ -2.07
SRP54P61011 AC090517.3-201ENST00000625170 141 ntBASIC2.11□□□□□ -2.07
SRP54P61011 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SRP54P61011 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SRP54P61011 CENPCP1-201ENST00000533085 2578 ntBASIC2.1□□□□□ -2.07
SRP54P61011 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
SRP54P61011 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SRP54P61011 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.1□□□□□ -2.07
SRP54P61011 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.1□□□□□ -2.07
SRP54P61011 RNU6-1120P-201ENST00000362988 108 ntBASIC2.1□□□□□ -2.07
SRP54P61011 Y_RNA.480-201ENST00000384364 102 ntBASIC2.1□□□□□ -2.07
SRP54P61011 RNU6-434P-201ENST00000384376 107 ntBASIC2.1□□□□□ -2.07
SRP54P61011 RNU6-393P-201ENST00000384475 107 ntBASIC2.1□□□□□ -2.07
SRP54P61011 RNU6-1274P-201ENST00000384557 107 ntBASIC2.1□□□□□ -2.07
SRP54P61011 MIR29B2-201ENST00000385055 81 ntBASIC2.1□□□□□ -2.07
SRP54P61011 RNU2-29P-201ENST00000410423 189 ntBASIC2.1□□□□□ -2.07
SRP54P61011 USP9YP18-201ENST00000425912 695 ntBASIC2.1□□□□□ -2.07
SRP54P61011 AL358934.1-201ENST00000432346 324 ntBASIC2.1□□□□□ -2.07
SRP54P61011 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.1□□□□□ -2.07
SRP54P61011 MTND4P32-201ENST00000437189 1237 ntBASIC2.1□□□□□ -2.07
SRP54P61011 GPM6BP3-201ENST00000442797 145 ntBASIC2.1□□□□□ -2.07
SRP54P61011 PSPHP1-201ENST00000450062 261 ntBASIC2.1□□□□□ -2.07
SRP54P61011 AL118520.1-201ENST00000450770 291 ntBASIC2.1□□□□□ -2.07
SRP54P61011 AL356010.1-201ENST00000456364 102 ntBASIC2.1□□□□□ -2.07
SRP54P61011 RNU6-956P-201ENST00000458868 103 ntBASIC2.1□□□□□ -2.07
SRP54P61011 AC107032.1-201ENST00000485945 480 ntBASIC2.1□□□□□ -2.07
SRP54P61011 AC010486.3-201ENST00000511602 785 ntBASIC2.1□□□□□ -2.07
SRP54P61011 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SRP54P61011 AC105417.1-201ENST00000514691 285 ntBASIC2.1□□□□□ -2.07
SRP54P61011 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SRP54P61011 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.1□□□□□ -2.07
SRP54P61011 MIR4528-201ENST00000577763 90 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms