Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 VN1R107P-201ENST00000601784 209 ntBASIC3.15□□□□□ -1.91
WNT3P56703 AL158827.2-201ENST00000602494 330 ntBASIC3.15□□□□□ -1.91
WNT3P56703 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.15□□□□□ -1.91
WNT3P56703 AP001836.1-201ENST00000604675 523 ntBASIC3.15□□□□□ -1.91
WNT3P56703 AC016925.2-201ENST00000605108 242 ntBASIC3.15□□□□□ -1.91
WNT3P56703 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.15□□□□□ -1.91
WNT3P56703 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.15□□□□□ -1.91
WNT3P56703 AL691447.3-201ENST00000635020 330 ntBASIC3.15□□□□□ -1.91
WNT3P56703 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
WNT3P56703 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.15□□□□□ -1.91
WNT3P56703 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
WNT3P56703 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
WNT3P56703 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
WNT3P56703 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
WNT3P56703 RBBP8P1-201ENST00000449447 1844 ntBASIC3.14□□□□□ -1.91
WNT3P56703 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
WNT3P56703 RNU1-105P-201ENST00000363470 161 ntBASIC3.14□□□□□ -1.91
WNT3P56703 RNU6-799P-201ENST00000363567 107 ntBASIC3.14□□□□□ -1.91
WNT3P56703 Y_RNA.202-201ENST00000364083 110 ntBASIC3.14□□□□□ -1.91
WNT3P56703 CD24P4-201ENST00000382840 243 ntBASIC3.14□□□□□ -1.91
WNT3P56703 SNORA22B-201ENST00000383876 138 ntBASIC3.14□□□□□ -1.91
WNT3P56703 RNA5SP354-201ENST00000391247 136 ntBASIC3.14□□□□□ -1.91
WNT3P56703 RNA5SP229-201ENST00000410809 99 ntBASIC3.14□□□□□ -1.91
WNT3P56703 AP000275.1-201ENST00000411943 390 ntBASIC3.14□□□□□ -1.91
WNT3P56703 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.14□□□□□ -1.91
WNT3P56703 NUP35P1-201ENST00000422734 947 ntBASIC3.14□□□□□ -1.91
WNT3P56703 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.14□□□□□ -1.91
WNT3P56703 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.14□□□□□ -1.91
WNT3P56703 RPL23AP22-201ENST00000437556 453 ntBASIC3.14□□□□□ -1.91
WNT3P56703 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.14□□□□□ -1.91
WNT3P56703 AL137792.2-201ENST00000443484 235 ntBASIC3.14□□□□□ -1.91
WNT3P56703 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.14□□□□□ -1.91
WNT3P56703 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.14□□□□□ -1.91
WNT3P56703 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.14□□□□□ -1.91
WNT3P56703 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.14□□□□□ -1.91
WNT3P56703 PHBP14-201ENST00000512887 367 ntBASIC3.14□□□□□ -1.91
WNT3P56703 SNORA31.23-201ENST00000517219 133 ntBASIC3.14□□□□□ -1.91
WNT3P56703 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
WNT3P56703 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.14□□□□□ -1.91
WNT3P56703 AC091152.3-201ENST00000604227 325 ntBASIC3.14□□□□□ -1.91
WNT3P56703 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.14□□□□□ -1.91
WNT3P56703 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
WNT3P56703 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.14□□□□□ -1.91
WNT3P56703 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
WNT3P56703 AC073346.2-201ENST00000624724 2058 ntBASIC3.13□□□□□ -1.91
WNT3P56703 AL021368.2-201ENST00000606125 5352 ntBASIC3.13□□□□□ -1.91
WNT3P56703 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
WNT3P56703 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
WNT3P56703 Y_RNA.5-201ENST00000362334 102 ntBASIC3.13□□□□□ -1.91
WNT3P56703 RNY1P16-201ENST00000363063 111 ntBASIC3.13□□□□□ -1.91
WNT3P56703 RNA5SP139-201ENST00000364340 117 ntBASIC3.13□□□□□ -1.91
WNT3P56703 RNU6-805P-201ENST00000365643 106 ntBASIC3.13□□□□□ -1.91
WNT3P56703 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.13□□□□□ -1.91
WNT3P56703 RNU6-1027P-201ENST00000383998 107 ntBASIC3.13□□□□□ -1.91
WNT3P56703 Y_RNA.428-201ENST00000384078 102 ntBASIC3.13□□□□□ -1.91
WNT3P56703 RNU6-843P-201ENST00000384454 104 ntBASIC3.13□□□□□ -1.91
WNT3P56703 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.13□□□□□ -1.91
WNT3P56703 EIF4EP2-201ENST00000422816 654 ntBASIC3.13□□□□□ -1.91
WNT3P56703 PMCHL1-202ENST00000423102 261 ntBASIC3.13□□□□□ -1.91
WNT3P56703 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.13□□□□□ -1.91
WNT3P56703 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.13□□□□□ -1.91
WNT3P56703 AL441985.1-201ENST00000457727 251 ntBASIC3.13□□□□□ -1.91
WNT3P56703 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.13□□□□□ -1.91
WNT3P56703 RPL30P12-201ENST00000474666 353 ntBASIC3.13□□□□□ -1.91
WNT3P56703 AC096576.1-201ENST00000489014 359 ntBASIC3.13□□□□□ -1.91
WNT3P56703 RPL17P19-201ENST00000489069 552 ntBASIC3.13□□□□□ -1.91
WNT3P56703 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.13□□□□□ -1.91
WNT3P56703 FCF1P8-201ENST00000510322 597 ntBASIC3.13□□□□□ -1.91
WNT3P56703 SNORA74D-201ENST00000516404 141 ntBASIC3.13□□□□□ -1.91
WNT3P56703 SNORD19.2-201ENST00000516978 73 ntBASIC3.13□□□□□ -1.91
WNT3P56703 RN7SKP295-201ENST00000517264 153 ntBASIC3.13□□□□□ -1.91
WNT3P56703 RNU6-988P-201ENST00000519081 107 ntBASIC3.13□□□□□ -1.91
WNT3P56703 AC093331.1-201ENST00000521474 169 ntBASIC3.13□□□□□ -1.91
WNT3P56703 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.13□□□□□ -1.91
WNT3P56703 AC010653.1-201ENST00000571108 881 ntBASIC3.13□□□□□ -1.91
WNT3P56703 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.13□□□□□ -1.91
WNT3P56703 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.13□□□□□ -1.91
WNT3P56703 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.13□□□□□ -1.91
WNT3P56703 AC005014.2-201ENST00000607795 599 ntBASIC3.13□□□□□ -1.91
WNT3P56703 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.13□□□□□ -1.91
WNT3P56703 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.13□□□□□ -1.91
WNT3P56703 AC006157.1-201ENST00000611750 366 ntBASIC3.13□□□□□ -1.91
WNT3P56703 uc_338.1-201ENST00000612113 180 ntBASIC3.13□□□□□ -1.91
WNT3P56703 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.13□□□□□ -1.91
WNT3P56703 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
WNT3P56703 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.13□□□□□ -1.91
WNT3P56703 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
WNT3P56703 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
WNT3P56703 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
WNT3P56703 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
WNT3P56703 ZNF299P-201ENST00000406845 1804 ntBASIC3.12□□□□□ -1.91
WNT3P56703 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
WNT3P56703 SNORD50.1-201ENST00000362987 71 ntBASIC3.12□□□□□ -1.91
WNT3P56703 Y_RNA.112-201ENST00000363250 102 ntBASIC3.12□□□□□ -1.91
WNT3P56703 Y_RNA.162-201ENST00000363683 102 ntBASIC3.12□□□□□ -1.91
WNT3P56703 RNU1-33P-201ENST00000364249 162 ntBASIC3.12□□□□□ -1.91
WNT3P56703 RNU6-99P-201ENST00000364721 107 ntBASIC3.12□□□□□ -1.91
WNT3P56703 RNU6-750P-201ENST00000390946 107 ntBASIC3.12□□□□□ -1.91
WNT3P56703 RNU6-1140P-201ENST00000410517 106 ntBASIC3.12□□□□□ -1.91
WNT3P56703 AL035666.1-201ENST00000446195 348 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms