Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
LIM2P55344 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LIM2P55344 RNA5SP125-201ENST00000364843 120 ntBASIC1.95□□□□□ -2.1
LIM2P55344 Y_RNA.324-201ENST00000365165 102 ntBASIC1.95□□□□□ -2.1
LIM2P55344 Y_RNA.359-201ENST00000365498 102 ntBASIC1.95□□□□□ -2.1
LIM2P55344 RNU6-301P-201ENST00000384277 107 ntBASIC1.95□□□□□ -2.1
LIM2P55344 Y_RNA.481-201ENST00000384373 102 ntBASIC1.95□□□□□ -2.1
LIM2P55344 SNORA51.11-201ENST00000384442 131 ntBASIC1.95□□□□□ -2.1
LIM2P55344 RNU2-23P-201ENST00000410545 195 ntBASIC1.95□□□□□ -2.1
LIM2P55344 PGBD4P6-201ENST00000421501 610 ntBASIC1.95□□□□□ -2.1
LIM2P55344 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.95□□□□□ -2.1
LIM2P55344 HMGB1P31-201ENST00000437242 427 ntBASIC1.95□□□□□ -2.1
LIM2P55344 RPL32P28-201ENST00000443577 397 ntBASIC1.95□□□□□ -2.1
LIM2P55344 MTND2P22-201ENST00000444325 1033 ntBASIC1.95□□□□□ -2.1
LIM2P55344 AC025033.1-201ENST00000463883 194 ntBASIC1.95□□□□□ -2.1
LIM2P55344 MTCO3P9-201ENST00000506989 781 ntBASIC1.95□□□□□ -2.1
LIM2P55344 RPL37P25-201ENST00000507308 276 ntBASIC1.95□□□□□ -2.1
LIM2P55344 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.95□□□□□ -2.1
LIM2P55344 RNU2-69P-201ENST00000516061 100 ntBASIC1.95□□□□□ -2.1
LIM2P55344 SNORA48.11-201ENST00000517015 89 ntBASIC1.95□□□□□ -2.1
LIM2P55344 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.95□□□□□ -2.1
LIM2P55344 COPS8P3-201ENST00000526024 482 ntBASIC1.95□□□□□ -2.1
LIM2P55344 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LIM2P55344 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.95□□□□□ -2.1
LIM2P55344 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.95□□□□□ -2.1
LIM2P55344 MTCYBP33-201ENST00000575007 1130 ntBASIC1.95□□□□□ -2.1
LIM2P55344 VN1R107P-201ENST00000601784 209 ntBASIC1.95□□□□□ -2.1
LIM2P55344 AP001330.5-201ENST00000607176 411 ntBASIC1.95□□□□□ -2.1
LIM2P55344 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
LIM2P55344 uc_338.15-201ENST00000615470 191 ntBASIC1.95□□□□□ -2.1
LIM2P55344 U4.7-201ENST00000638126 106 ntBASIC1.95□□□□□ -2.1
LIM2P55344 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LIM2P55344 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LIM2P55344 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
LIM2P55344 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.94□□□□□ -2.1
LIM2P55344 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
LIM2P55344 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LIM2P55344 RNU6-996P-201ENST00000365438 107 ntBASIC1.94□□□□□ -2.1
LIM2P55344 SNORA70B-201ENST00000384210 135 ntBASIC1.94□□□□□ -2.1
LIM2P55344 MIR186-201ENST00000384988 86 ntBASIC1.94□□□□□ -2.1
LIM2P55344 RNU2-16P-201ENST00000410712 136 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AL139156.1-201ENST00000412785 841 ntBASIC1.94□□□□□ -2.1
LIM2P55344 BTF3L4P1-201ENST00000413813 468 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AC138623.1-201ENST00000418060 216 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AC010975.2-201ENST00000427781 588 ntBASIC1.94□□□□□ -2.1
LIM2P55344 TIMM9P3-201ENST00000428659 274 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LIM2P55344 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.94□□□□□ -2.1
LIM2P55344 DNAJC19P4-201ENST00000440115 345 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AL161788.1-201ENST00000441805 169 ntBASIC1.94□□□□□ -2.1
LIM2P55344 PRPS1P1-201ENST00000445305 876 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AC073415.1-201ENST00000449240 153 ntBASIC1.94□□□□□ -2.1
LIM2P55344 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.94□□□□□ -2.1
LIM2P55344 AL163973.1-201ENST00000484753 577 ntBASIC1.94□□□□□ -2.1
LIM2P55344 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.94□□□□□ -2.1
LIM2P55344 AC093534.1-201ENST00000504977 132 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.94□□□□□ -2.1
LIM2P55344 MTCO3P7-201ENST00000510008 774 ntBASIC1.94□□□□□ -2.1
LIM2P55344 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.94□□□□□ -2.1
LIM2P55344 SNORA40.12-201ENST00000516329 111 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.94□□□□□ -2.1
LIM2P55344 IGKV3-31-201ENST00000523109 329 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.94□□□□□ -2.1
LIM2P55344 AC023050.3-201ENST00000541142 333 ntBASIC1.94□□□□□ -2.1
LIM2P55344 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.94□□□□□ -2.1
LIM2P55344 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.94□□□□□ -2.1
LIM2P55344 MIR4648-201ENST00000580107 72 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AC008752.3-201ENST00000588113 712 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.94□□□□□ -2.1
LIM2P55344 AC012507.3-201ENST00000603556 477 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AC091805.2-201ENST00000603848 235 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AL136363.2-201ENST00000604173 851 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AC097065.2-201ENST00000608159 533 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AC007684.1-201ENST00000609671 477 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AC013412.1-201ENST00000610687 192 ntBASIC1.94□□□□□ -2.1
LIM2P55344 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.94□□□□□ -2.1
LIM2P55344 AC007792.1-201ENST00000623023 402 ntBASIC1.94□□□□□ -2.1
LIM2P55344 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LIM2P55344 RNA5SP138-201ENST00000365098 114 ntBASIC1.93□□□□□ -2.1
LIM2P55344 MIR524-201ENST00000385242 87 ntBASIC1.93□□□□□ -2.1
LIM2P55344 SNORA16.2-201ENST00000390991 127 ntBASIC1.93□□□□□ -2.1
LIM2P55344 SNORD70.1-201ENST00000391007 85 ntBASIC1.93□□□□□ -2.1
LIM2P55344 RNU4-55P-201ENST00000410731 137 ntBASIC1.93□□□□□ -2.1
LIM2P55344 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.93□□□□□ -2.1
LIM2P55344 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
LIM2P55344 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.93□□□□□ -2.1
LIM2P55344 USP9YP8-201ENST00000441913 500 ntBASIC1.93□□□□□ -2.1
LIM2P55344 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.93□□□□□ -2.1
LIM2P55344 AL139109.1-201ENST00000455491 297 ntBASIC1.93□□□□□ -2.1
LIM2P55344 SCARNA18-201ENST00000459004 134 ntBASIC1.93□□□□□ -2.1
LIM2P55344 RNU7-167P-201ENST00000459160 62 ntBASIC1.93□□□□□ -2.1
LIM2P55344 RNU7-180P-201ENST00000459240 63 ntBASIC1.93□□□□□ -2.1
LIM2P55344 RPS29P21-201ENST00000496272 170 ntBASIC1.93□□□□□ -2.1
LIM2P55344 MTND3P5-201ENST00000512798 333 ntBASIC1.93□□□□□ -2.1
LIM2P55344 RNU1-41P-201ENST00000516161 162 ntBASIC1.93□□□□□ -2.1
LIM2P55344 RNU1-48P-201ENST00000516400 162 ntBASIC1.93□□□□□ -2.1
LIM2P55344 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
LIM2P55344 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
LIM2P55344 AC069113.1-201ENST00000517763 267 ntBASIC1.93□□□□□ -2.1
LIM2P55344 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms