Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 GNAI2P1-201ENST00000541815 315 ntBASIC1.66□□□□□ -2.14
CDH6P55285 AC022254.1-201ENST00000567857 235 ntBASIC1.66□□□□□ -2.14
CDH6P55285 MIR5692A1-201ENST00000580523 69 ntBASIC1.66□□□□□ -2.14
CDH6P55285 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.66□□□□□ -2.14
CDH6P55285 AC026585.1-201ENST00000619582 524 ntBASIC1.66□□□□□ -2.14
CDH6P55285 Y_RNA.22-201ENST00000362492 102 ntBASIC1.65□□□□□ -2.15
CDH6P55285 SNORD56.1-201ENST00000362913 68 ntBASIC1.65□□□□□ -2.15
CDH6P55285 SNORA72.3-201ENST00000365074 132 ntBASIC1.65□□□□□ -2.15
CDH6P55285 BTF3L4P2-201ENST00000392798 346 ntBASIC1.65□□□□□ -2.15
CDH6P55285 OR9R1P-201ENST00000412200 877 ntBASIC1.65□□□□□ -2.15
CDH6P55285 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.65□□□□□ -2.15
CDH6P55285 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.65□□□□□ -2.15
CDH6P55285 UBE2D3P4-201ENST00000441973 436 ntBASIC1.65□□□□□ -2.15
CDH6P55285 AL360271.2-201ENST00000447710 161 ntBASIC1.65□□□□□ -2.15
CDH6P55285 FDX1P2-201ENST00000450769 375 ntBASIC1.65□□□□□ -2.15
CDH6P55285 AL353752.1-201ENST00000454946 260 ntBASIC1.65□□□□□ -2.15
CDH6P55285 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.65□□□□□ -2.15
CDH6P55285 AC087884.1-201ENST00000469738 328 ntBASIC1.65□□□□□ -2.15
CDH6P55285 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.65□□□□□ -2.15
CDH6P55285 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.65□□□□□ -2.15
CDH6P55285 RNU6-548P-201ENST00000517083 115 ntBASIC1.65□□□□□ -2.15
CDH6P55285 AC022616.3-201ENST00000523940 148 ntBASIC1.65□□□□□ -2.15
CDH6P55285 AP001372.4-201ENST00000524889 472 ntBASIC1.65□□□□□ -2.15
CDH6P55285 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.65□□□□□ -2.15
CDH6P55285 AC022878.1-201ENST00000530684 149 ntBASIC1.65□□□□□ -2.15
CDH6P55285 RPL21P5-201ENST00000554662 472 ntBASIC1.65□□□□□ -2.15
CDH6P55285 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.65□□□□□ -2.15
CDH6P55285 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.65□□□□□ -2.15
CDH6P55285 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.65□□□□□ -2.15
CDH6P55285 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.65□□□□□ -2.15
CDH6P55285 AC022022.2-201ENST00000602989 360 ntBASIC1.65□□□□□ -2.15
CDH6P55285 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.65□□□□□ -2.15
CDH6P55285 AL159153.1-201ENST00000619688 317 ntBASIC1.65□□□□□ -2.15
CDH6P55285 AC099842.1-201ENST00000619919 596 ntBASIC1.65□□□□□ -2.15
CDH6P55285 AC019226.2-201ENST00000625973 424 ntBASIC1.65□□□□□ -2.15
CDH6P55285 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CDH6P55285 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.65□□□□□ -2.15
CDH6P55285 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.64□□□□□ -2.15
CDH6P55285 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CDH6P55285 RNU1-58P-201ENST00000362413 163 ntBASIC1.64□□□□□ -2.15
CDH6P55285 RNU6-371P-201ENST00000364283 108 ntBASIC1.64□□□□□ -2.15
CDH6P55285 RNU6-1164P-201ENST00000364428 107 ntBASIC1.64□□□□□ -2.15
CDH6P55285 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.64□□□□□ -2.15
CDH6P55285 RPL23AP32-201ENST00000395315 459 ntBASIC1.64□□□□□ -2.15
CDH6P55285 RNU2-8P-201ENST00000410727 190 ntBASIC1.64□□□□□ -2.15
CDH6P55285 RNU6-387P-201ENST00000411331 105 ntBASIC1.64□□□□□ -2.15
CDH6P55285 POLHP1-201ENST00000411806 470 ntBASIC1.64□□□□□ -2.15
CDH6P55285 EEF1A1P40-201ENST00000412883 573 ntBASIC1.64□□□□□ -2.15
CDH6P55285 C1DP2-201ENST00000418167 426 ntBASIC1.64□□□□□ -2.15
CDH6P55285 AC010099.3-201ENST00000423896 409 ntBASIC1.64□□□□□ -2.15
CDH6P55285 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH6P55285 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH6P55285 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH6P55285 RNA5SP57-201ENST00000459463 123 ntBASIC1.64□□□□□ -2.15
CDH6P55285 RPL30P12-201ENST00000474666 353 ntBASIC1.64□□□□□ -2.15
CDH6P55285 RPL30P1-201ENST00000488676 339 ntBASIC1.64□□□□□ -2.15
CDH6P55285 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.64□□□□□ -2.15
CDH6P55285 RNU6-970P-201ENST00000516312 107 ntBASIC1.64□□□□□ -2.15
CDH6P55285 RNU6-965P-201ENST00000516721 96 ntBASIC1.64□□□□□ -2.15
CDH6P55285 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH6P55285 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.64□□□□□ -2.15
CDH6P55285 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
CDH6P55285 MIR4298-201ENST00000584380 73 ntBASIC1.64□□□□□ -2.15
CDH6P55285 MIR548AB-201ENST00000584917 84 ntBASIC1.64□□□□□ -2.15
CDH6P55285 AC008521.1-201ENST00000587471 187 ntBASIC1.64□□□□□ -2.15
CDH6P55285 CYP2C61P-201ENST00000604072 290 ntBASIC1.64□□□□□ -2.15
CDH6P55285 AL136363.2-201ENST00000604173 851 ntBASIC1.64□□□□□ -2.15
CDH6P55285 AL022161.1-201ENST00000604390 213 ntBASIC1.64□□□□□ -2.15
CDH6P55285 AL022345.1-201ENST00000607292 135 ntBASIC1.64□□□□□ -2.15
CDH6P55285 AL451064.1-201ENST00000607718 471 ntBASIC1.64□□□□□ -2.15
CDH6P55285 RMST_7.1-201ENST00000621935 268 ntBASIC1.64□□□□□ -2.15
CDH6P55285 AL359740.1-201ENST00000624340 592 ntBASIC1.64□□□□□ -2.15
CDH6P55285 snoU2_19.1-201ENST00000362361 80 ntBASIC1.63□□□□□ -2.15
CDH6P55285 Y_RNA.99-201ENST00000363138 105 ntBASIC1.63□□□□□ -2.15
CDH6P55285 RNY1P12-201ENST00000364251 105 ntBASIC1.63□□□□□ -2.15
CDH6P55285 RNA5SP190-201ENST00000365222 118 ntBASIC1.63□□□□□ -2.15
CDH6P55285 RNU6-61P-201ENST00000365528 109 ntBASIC1.63□□□□□ -2.15
CDH6P55285 SNORA20.2-201ENST00000383922 131 ntBASIC1.63□□□□□ -2.15
CDH6P55285 MIR597-201ENST00000384968 97 ntBASIC1.63□□□□□ -2.15
CDH6P55285 RPL21P90-201ENST00000415692 466 ntBASIC1.63□□□□□ -2.15
CDH6P55285 CALM2P2-201ENST00000428512 440 ntBASIC1.63□□□□□ -2.15
CDH6P55285 CBX3P6-201ENST00000430257 527 ntBASIC1.63□□□□□ -2.15
CDH6P55285 RPS15AP10-201ENST00000432472 382 ntBASIC1.63□□□□□ -2.15
CDH6P55285 TAF9P1-201ENST00000445421 515 ntBASIC1.63□□□□□ -2.15
CDH6P55285 TAF9P2-201ENST00000454958 515 ntBASIC1.63□□□□□ -2.15
CDH6P55285 BZW1P2-201ENST00000473537 826 ntBASIC1.63□□□□□ -2.15
CDH6P55285 MTCO3P9-201ENST00000506989 781 ntBASIC1.63□□□□□ -2.15
CDH6P55285 RNU1-86P-201ENST00000516108 154 ntBASIC1.63□□□□□ -2.15
CDH6P55285 RNU1-107P-201ENST00000516617 154 ntBASIC1.63□□□□□ -2.15
CDH6P55285 AP005660.1-201ENST00000522972 293 ntBASIC1.63□□□□□ -2.15
CDH6P55285 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH6P55285 AP005435.4-201ENST00000529514 284 ntBASIC1.63□□□□□ -2.15
CDH6P55285 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH6P55285 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.63□□□□□ -2.15
CDH6P55285 AC005771.1-201ENST00000585581 349 ntBASIC1.63□□□□□ -2.15
CDH6P55285 AC078795.2-201ENST00000602835 1252 ntBASIC1.63□□□□□ -2.15
CDH6P55285 AL121992.2-201ENST00000606262 256 ntBASIC1.63□□□□□ -2.15
CDH6P55285 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.63□□□□□ -2.15
CDH6P55285 AC131159.1-201ENST00000621854 213 ntBASIC1.63□□□□□ -2.15
CDH6P55285 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms