Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 S100A11P1-201ENST00000477525 312 ntBASIC4.36□□□□□ -1.71
EPHA4P54764 AC006517.1-201ENST00000480485 328 ntBASIC4.36□□□□□ -1.71
EPHA4P54764 AC103975.1-201ENST00000482506 483 ntBASIC4.36□□□□□ -1.71
EPHA4P54764 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.36□□□□□ -1.71
EPHA4P54764 RN7SKP164-201ENST00000516138 266 ntBASIC4.36□□□□□ -1.71
EPHA4P54764 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.36□□□□□ -1.71
EPHA4P54764 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.36□□□□□ -1.71
EPHA4P54764 MIR3609-201ENST00000582661 80 ntBASIC4.36□□□□□ -1.71
EPHA4P54764 AC011471.1-201ENST00000585766 187 ntBASIC4.36□□□□□ -1.71
EPHA4P54764 AL034555.1-201ENST00000604816 211 ntBASIC4.36□□□□□ -1.71
EPHA4P54764 MIR6716-201ENST00000613413 80 ntBASIC4.36□□□□□ -1.71
EPHA4P54764 AL078604.3-201ENST00000615580 211 ntBASIC4.36□□□□□ -1.71
EPHA4P54764 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
EPHA4P54764 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EPHA4P54764 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
EPHA4P54764 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EPHA4P54764 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
EPHA4P54764 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.35□□□□□ -1.71
EPHA4P54764 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
EPHA4P54764 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.35□□□□□ -1.71
EPHA4P54764 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
EPHA4P54764 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.35□□□□□ -1.71
EPHA4P54764 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
EPHA4P54764 RNU6-275P-201ENST00000364910 107 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 RNU6-239P-201ENST00000390990 99 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 CBX3P9-201ENST00000402326 552 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 U3.40-201ENST00000408706 208 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 EBAG9P1-201ENST00000418955 543 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 RPS29P17-201ENST00000430795 166 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 CR769767.1-201ENST00000436337 346 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
EPHA4P54764 RN7SL98P-201ENST00000462271 300 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 RN7SL303P-201ENST00000469773 251 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 AC109327.1-201ENST00000471666 403 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 AC108022.1-201ENST00000493466 478 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 SNORD116-25-201ENST00000516517 92 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 IGLVIV-65-201ENST00000517313 360 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 TOMM20P2-201ENST00000540082 421 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 AC015912.2-201ENST00000571053 181 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 AC025946.2-201ENST00000603398 234 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.35□□□□□ -1.71
EPHA4P54764 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.35□□□□□ -1.71
EPHA4P54764 MIR6830-201ENST00000636015 70 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
EPHA4P54764 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
EPHA4P54764 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.35□□□□□ -1.71
EPHA4P54764 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.35□□□□□ -1.71
EPHA4P54764 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
EPHA4P54764 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.35□□□□□ -1.71
EPHA4P54764 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
EPHA4P54764 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.35□□□□□ -1.71
EPHA4P54764 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
EPHA4P54764 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
EPHA4P54764 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EPHA4P54764 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
EPHA4P54764 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EPHA4P54764 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
EPHA4P54764 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
EPHA4P54764 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EPHA4P54764 RNU6-103P-201ENST00000363686 107 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 RNU6-748P-201ENST00000384648 107 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 RNU6-19P-201ENST00000384718 107 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 MIR186-201ENST00000384988 86 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 RNU6-1168P-201ENST00000390831 104 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 RNU6-710P-201ENST00000410424 105 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 RPL23AP82-202ENST00000427528 469 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.34□□□□□ -1.71
EPHA4P54764 AL353748.1-201ENST00000440753 474 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 AC008267.6-201ENST00000441664 139 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 RNA5SP310-201ENST00000459084 116 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 RNU2-58P-201ENST00000516403 183 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 SNORD19.2-201ENST00000516978 73 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 RNU2-12P-201ENST00000517216 168 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 AC100767.1-201ENST00000528178 123 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.34□□□□□ -1.71
EPHA4P54764 SNORD11B-201ENST00000607707 90 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 AL110115.1-201ENST00000614396 364 ntBASIC4.34□□□□□ -1.71
EPHA4P54764 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
EPHA4P54764 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.34□□□□□ -1.71
EPHA4P54764 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
EPHA4P54764 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
EPHA4P54764 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
EPHA4P54764 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHA4P54764 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA4P54764 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
EPHA4P54764 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA4P54764 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHA4P54764 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
EPHA4P54764 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA4P54764 RNU6-763P-201ENST00000390865 106 ntBASIC4.33□□□□□ -1.72
EPHA4P54764 Y_RNA.586-201ENST00000391146 98 ntBASIC4.33□□□□□ -1.72
EPHA4P54764 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.33□□□□□ -1.72
EPHA4P54764 PHBP16-201ENST00000446318 950 ntBASIC4.33□□□□□ -1.72
EPHA4P54764 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHA4P54764 AC012671.1-201ENST00000451912 203 ntBASIC4.33□□□□□ -1.72
EPHA4P54764 Y_RNA.637-201ENST00000459424 114 ntBASIC4.33□□□□□ -1.72
EPHA4P54764 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.33□□□□□ -1.72
EPHA4P54764 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHA4P54764 RNU5F-2P-201ENST00000516066 82 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms