Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.54□□□□□ -2
LIMK1P53667 AC105245.1-201ENST00000581934 244 ntBASIC2.54□□□□□ -2
LIMK1P53667 BNIP3P30-201ENST00000601184 574 ntBASIC2.54□□□□□ -2
LIMK1P53667 AC016727.1-205ENST00000605437 569 ntBASIC2.54□□□□□ -2
LIMK1P53667 U2.17-201ENST00000611454 95 ntBASIC2.54□□□□□ -2
LIMK1P53667 RMST_4.1-201ENST00000616886 107 ntBASIC2.54□□□□□ -2
LIMK1P53667 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.54□□□□□ -2
LIMK1P53667 uc_338.34-201ENST00000617467 174 ntBASIC2.54□□□□□ -2
LIMK1P53667 AC022418.1-201ENST00000624118 445 ntBASIC2.54□□□□□ -2
LIMK1P53667 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LIMK1P53667 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LIMK1P53667 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.54□□□□□ -2
LIMK1P53667 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
LIMK1P53667 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.53□□□□□ -2
LIMK1P53667 AC002543.1-201ENST00000299783 1954 ntBASIC2.53□□□□□ -2
LIMK1P53667 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.53□□□□□ -2
LIMK1P53667 RNU6-37P-201ENST00000362692 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-11P-201ENST00000364234 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-25P-201ENST00000383873 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-1-201ENST00000383898 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-48P-201ENST00000384161 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-36P-201ENST00000384172 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-4P-201ENST00000384205 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-5P-201ENST00000384238 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-3P-201ENST00000384314 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-16P-201ENST00000384385 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-15P-201ENST00000384534 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-2-201ENST00000384627 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-29P-201ENST00000384637 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-9-201ENST00000384776 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-33P-201ENST00000384793 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 MIR518C-201ENST00000384822 101 ntBASIC2.53□□□□□ -2
LIMK1P53667 CALM2P3-201ENST00000400429 449 ntBASIC2.53□□□□□ -2
LIMK1P53667 CYCSP33-201ENST00000414485 327 ntBASIC2.53□□□□□ -2
LIMK1P53667 RPS3AP44-201ENST00000425466 790 ntBASIC2.53□□□□□ -2
LIMK1P53667 TIMM9P3-201ENST00000428659 274 ntBASIC2.53□□□□□ -2
LIMK1P53667 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.53□□□□□ -2
LIMK1P53667 VN1R108P-201ENST00000431580 830 ntBASIC2.53□□□□□ -2
LIMK1P53667 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.53□□□□□ -2
LIMK1P53667 AL121601.2-201ENST00000438019 707 ntBASIC2.53□□□□□ -2
LIMK1P53667 AC016691.1-201ENST00000441321 413 ntBASIC2.53□□□□□ -2
LIMK1P53667 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.53□□□□□ -2
LIMK1P53667 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.53□□□□□ -2
LIMK1P53667 CACYBPP2-201ENST00000453625 678 ntBASIC2.53□□□□□ -2
LIMK1P53667 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.53□□□□□ -2
LIMK1P53667 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.53□□□□□ -2
LIMK1P53667 RPL23AP49-201ENST00000492925 468 ntBASIC2.53□□□□□ -2
LIMK1P53667 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.53□□□□□ -2
LIMK1P53667 MTCO3P9-201ENST00000506989 781 ntBASIC2.53□□□□□ -2
LIMK1P53667 AC079140.5-201ENST00000507882 310 ntBASIC2.53□□□□□ -2
LIMK1P53667 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.53□□□□□ -2
LIMK1P53667 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.53□□□□□ -2
LIMK1P53667 RN7SKP24-201ENST00000515888 284 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU2-69P-201ENST00000516061 100 ntBASIC2.53□□□□□ -2
LIMK1P53667 SNORA43.2-201ENST00000516652 128 ntBASIC2.53□□□□□ -2
LIMK1P53667 AC104383.1-201ENST00000530297 370 ntBASIC2.53□□□□□ -2
LIMK1P53667 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.53□□□□□ -2
LIMK1P53667 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.53□□□□□ -2
LIMK1P53667 OR11H5P-201ENST00000554039 926 ntBASIC2.53□□□□□ -2
LIMK1P53667 AL133241.1-201ENST00000556832 487 ntBASIC2.53□□□□□ -2
LIMK1P53667 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.53□□□□□ -2
LIMK1P53667 LRRC37A5P-203ENST00000580181 585 ntBASIC2.53□□□□□ -2
LIMK1P53667 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.53□□□□□ -2
LIMK1P53667 AL356575.1-201ENST00000603008 283 ntBASIC2.53□□□□□ -2
LIMK1P53667 RNU6-6P-201ENST00000606623 107 ntBASIC2.53□□□□□ -2
LIMK1P53667 AP001330.5-201ENST00000607176 411 ntBASIC2.53□□□□□ -2
LIMK1P53667 AC064807.4-201ENST00000607201 407 ntBASIC2.53□□□□□ -2
LIMK1P53667 AC068792.1-201ENST00000621354 417 ntBASIC2.53□□□□□ -2
LIMK1P53667 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.53□□□□□ -2
LIMK1P53667 AC138627.2-201ENST00000624202 601 ntBASIC2.53□□□□□ -2
LIMK1P53667 AC099654.12-201ENST00000639868 649 ntBASIC2.53□□□□□ -2
LIMK1P53667 RBBP8P1-201ENST00000449447 1844 ntBASIC2.53□□□□□ -2
LIMK1P53667 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.53□□□□□ -2
LIMK1P53667 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.53□□□□□ -2
LIMK1P53667 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.53□□□□□ -2
LIMK1P53667 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2.01
LIMK1P53667 AL354685.2-201ENST00000448218 1447 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LIMK1P53667 RNU6-942P-201ENST00000363002 107 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 SNORD114-19-201ENST00000363072 75 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 SNORA69-201ENST00000383895 132 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 Y_RNA.480-201ENST00000384364 102 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 SNORA16.2-201ENST00000390991 127 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.52□□□□□ -2.01
LIMK1P53667 RNU2-3P-201ENST00000410144 191 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LIMK1P53667 RPL30P4-201ENST00000429309 333 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.52□□□□□ -2.01
LIMK1P53667 AC124916.1-201ENST00000444020 547 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.52□□□□□ -2.01
LIMK1P53667 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.52□□□□□ -2.01
LIMK1P53667 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LIMK1P53667 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.52□□□□□ -2.01
LIMK1P53667 RNU6-261P-201ENST00000459506 102 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 DYNLL1P5-201ENST00000467158 270 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 RN7SL636P-201ENST00000497504 294 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 TBCAP3-201ENST00000512475 312 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 SMURF2P1-201ENST00000514992 481 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 SNORA40.12-201ENST00000516329 111 ntBASIC2.52□□□□□ -2.01
LIMK1P53667 RNU6-506P-201ENST00000516553 94 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms