Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.57□□□□□ -2
LBX1P52954 MTND4P35-201ENST00000604257 1375 ntBASIC2.57□□□□□ -2
LBX1P52954 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.57□□□□□ -2
LBX1P52954 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.57□□□□□ -2
LBX1P52954 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.56□□□□□ -2
LBX1P52954 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LBX1P52954 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LBX1P52954 Y_RNA.89-201ENST00000363031 102 ntBASIC2.56□□□□□ -2
LBX1P52954 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.56□□□□□ -2
LBX1P52954 MIR1277-201ENST00000408536 78 ntBASIC2.56□□□□□ -2
LBX1P52954 MIR1276-201ENST00000408707 83 ntBASIC2.56□□□□□ -2
LBX1P52954 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.56□□□□□ -2
LBX1P52954 RNU4-62P-201ENST00000410125 130 ntBASIC2.56□□□□□ -2
LBX1P52954 RNU6-1068P-201ENST00000410958 103 ntBASIC2.56□□□□□ -2
LBX1P52954 USP9YP27-201ENST00000418455 438 ntBASIC2.56□□□□□ -2
LBX1P52954 AL445646.1-201ENST00000431784 216 ntBASIC2.56□□□□□ -2
LBX1P52954 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.56□□□□□ -2
LBX1P52954 AL078601.1-201ENST00000444542 271 ntBASIC2.56□□□□□ -2
LBX1P52954 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.56□□□□□ -2
LBX1P52954 RPS29P12-201ENST00000460178 152 ntBASIC2.56□□□□□ -2
LBX1P52954 AC107626.1-201ENST00000471084 183 ntBASIC2.56□□□□□ -2
LBX1P52954 RPS15AP34-201ENST00000487776 387 ntBASIC2.56□□□□□ -2
LBX1P52954 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.56□□□□□ -2
LBX1P52954 RAC1P5-201ENST00000512182 576 ntBASIC2.56□□□□□ -2
LBX1P52954 LRRC34P2-201ENST00000514850 553 ntBASIC2.56□□□□□ -2
LBX1P52954 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.56□□□□□ -2
LBX1P52954 SNORD60.2-201ENST00000516883 86 ntBASIC2.56□□□□□ -2
LBX1P52954 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.56□□□□□ -2
LBX1P52954 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.56□□□□□ -2
LBX1P52954 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.56□□□□□ -2
LBX1P52954 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.56□□□□□ -2
LBX1P52954 MIR6504-201ENST00000613520 61 ntBASIC2.56□□□□□ -2
LBX1P52954 uc_338.34-201ENST00000617467 174 ntBASIC2.56□□□□□ -2
LBX1P52954 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
LBX1P52954 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.56□□□□□ -2
LBX1P52954 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.56□□□□□ -2
LBX1P52954 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.56□□□□□ -2
LBX1P52954 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LBX1P52954 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
LBX1P52954 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.55□□□□□ -2
LBX1P52954 RNY1-201ENST00000364228 113 ntBASIC2.55□□□□□ -2
LBX1P52954 RNU4-12P-201ENST00000365233 139 ntBASIC2.55□□□□□ -2
LBX1P52954 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LBX1P52954 RNU6-45P-201ENST00000384471 107 ntBASIC2.55□□□□□ -2
LBX1P52954 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.55□□□□□ -2
LBX1P52954 SNORD115-47-201ENST00000391226 86 ntBASIC2.55□□□□□ -2
LBX1P52954 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.55□□□□□ -2
LBX1P52954 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.55□□□□□ -2
LBX1P52954 Y_RNA.623-201ENST00000411128 95 ntBASIC2.55□□□□□ -2
LBX1P52954 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.55□□□□□ -2
LBX1P52954 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.55□□□□□ -2
LBX1P52954 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.55□□□□□ -2
LBX1P52954 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.55□□□□□ -2
LBX1P52954 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.55□□□□□ -2
LBX1P52954 RPS15AP28-201ENST00000435088 386 ntBASIC2.55□□□□□ -2
LBX1P52954 AC018634.1-201ENST00000437554 401 ntBASIC2.55□□□□□ -2
LBX1P52954 RBMX2P4-201ENST00000441256 376 ntBASIC2.55□□□□□ -2
LBX1P52954 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.55□□□□□ -2
LBX1P52954 AL583843.1-201ENST00000456070 346 ntBASIC2.55□□□□□ -2
LBX1P52954 SNRPFP3-201ENST00000457792 225 ntBASIC2.55□□□□□ -2
LBX1P52954 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.55□□□□□ -2
LBX1P52954 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.55□□□□□ -2
LBX1P52954 SNORA25.17-201ENST00000517184 124 ntBASIC2.55□□□□□ -2
LBX1P52954 RN7SKP40-201ENST00000517211 242 ntBASIC2.55□□□□□ -2
LBX1P52954 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.55□□□□□ -2
LBX1P52954 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.55□□□□□ -2
LBX1P52954 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.55□□□□□ -2
LBX1P52954 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.55□□□□□ -2
LBX1P52954 PSMA3P-201ENST00000555485 635 ntBASIC2.55□□□□□ -2
LBX1P52954 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.55□□□□□ -2
LBX1P52954 AC138915.1-201ENST00000565427 1685 ntBASIC2.55□□□□□ -2
LBX1P52954 SNORA59B-202ENST00000578183 701 ntBASIC2.55□□□□□ -2
LBX1P52954 AC104458.1-201ENST00000608243 463 ntBASIC2.55□□□□□ -2
LBX1P52954 AC007014.2-201ENST00000615581 479 ntBASIC2.55□□□□□ -2
LBX1P52954 AC110079.1-202ENST00000635213 138 ntBASIC2.55□□□□□ -2
LBX1P52954 MIR6733-201ENST00000635723 61 ntBASIC2.55□□□□□ -2
LBX1P52954 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LBX1P52954 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.54□□□□□ -2
LBX1P52954 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LBX1P52954 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.54□□□□□ -2
LBX1P52954 RNU6-1303P-201ENST00000364841 107 ntBASIC2.54□□□□□ -2
LBX1P52954 RNU6-1283P-201ENST00000365314 105 ntBASIC2.54□□□□□ -2
LBX1P52954 U8.10-201ENST00000384260 133 ntBASIC2.54□□□□□ -2
LBX1P52954 SNORA26.7-201ENST00000391288 122 ntBASIC2.54□□□□□ -2
LBX1P52954 RNA5SP492-201ENST00000411330 114 ntBASIC2.54□□□□□ -2
LBX1P52954 AL627311.1-201ENST00000431514 115 ntBASIC2.54□□□□□ -2
LBX1P52954 RPS15AP5-201ENST00000436276 388 ntBASIC2.54□□□□□ -2
LBX1P52954 CALM1P1-201ENST00000442082 433 ntBASIC2.54□□□□□ -2
LBX1P52954 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.54□□□□□ -2
LBX1P52954 SCARNA18-201ENST00000459004 134 ntBASIC2.54□□□□□ -2
LBX1P52954 HMGN2P26-201ENST00000463169 339 ntBASIC2.54□□□□□ -2
LBX1P52954 DYNLL1P5-201ENST00000467158 270 ntBASIC2.54□□□□□ -2
LBX1P52954 AL121594.1-201ENST00000475906 575 ntBASIC2.54□□□□□ -2
LBX1P52954 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.54□□□□□ -2
LBX1P52954 AC091885.1-201ENST00000506658 268 ntBASIC2.54□□□□□ -2
LBX1P52954 MTND3P25-201ENST00000509243 135 ntBASIC2.54□□□□□ -2
LBX1P52954 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.54□□□□□ -2
LBX1P52954 RNA5SP401-201ENST00000515920 127 ntBASIC2.54□□□□□ -2
LBX1P52954 RNU6-718P-201ENST00000516166 105 ntBASIC2.54□□□□□ -2
LBX1P52954 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms