Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.45□□□□□ -2.34
POLR2JP52435 MIR3529-201ENST00000637713 78 ntBASIC0.45□□□□□ -2.34
POLR2JP52435 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.44□□□□□ -2.34
POLR2JP52435 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.44□□□□□ -2.34
POLR2JP52435 CDR1-202ENST00000625883 1485 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
POLR2JP52435 RNU6-942P-201ENST00000363002 107 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 RNU6-650P-201ENST00000365658 111 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 MIR520A-201ENST00000384862 85 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 RNU2-23P-201ENST00000410545 195 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 RNU2-42P-201ENST00000410697 113 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.44□□□□□ -2.34
POLR2JP52435 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.44□□□□□ -2.34
POLR2JP52435 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.44□□□□□ -2.34
POLR2JP52435 AC010099.3-201ENST00000423896 409 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 RAC1P6-201ENST00000423911 575 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 CBX3P6-201ENST00000430257 527 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 MTND4P6-201ENST00000438297 472 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 AL606517.1-201ENST00000446914 387 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 SNRPFP3-201ENST00000457792 225 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 RNU6-333P-201ENST00000459117 107 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.44□□□□□ -2.34
POLR2JP52435 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.44□□□□□ -2.34
POLR2JP52435 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.44□□□□□ -2.34
POLR2JP52435 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.44□□□□□ -2.34
POLR2JP52435 HMGB1P33-201ENST00000563485 527 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.44□□□□□ -2.34
POLR2JP52435 ZNF92P2-201ENST00000600543 1059 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 AC130324.3-201ENST00000614165 542 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 AC063943.3-201ENST00000615562 356 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.44□□□□□ -2.34
POLR2JP52435 AC092656.1-203ENST00000624134 423 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.44□□□□□ -2.34
POLR2JP52435 AC068647.2-201ENST00000637380 353 ntBASIC0.44□□□□□ -2.34
POLR2JP52435 MIR16-2-201ENST00000362117 81 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 Y_RNA.332-201ENST00000365271 113 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 RNU6-883P-201ENST00000384597 107 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 MIR605-201ENST00000385078 83 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.43□□□□□ -2.34
POLR2JP52435 DEFB130D-201ENST00000426866 237 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 RPS15AP10-201ENST00000432472 382 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.43□□□□□ -2.34
POLR2JP52435 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.43□□□□□ -2.34
POLR2JP52435 ELOCP30-201ENST00000447108 299 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 SNORD124-201ENST00000459577 104 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 RPS27P22-201ENST00000478056 241 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.43□□□□□ -2.34
POLR2JP52435 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.43□□□□□ -2.34
POLR2JP52435 RNA5SP503-201ENST00000517047 117 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.43□□□□□ -2.34
POLR2JP52435 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.43□□□□□ -2.34
POLR2JP52435 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
POLR2JP52435 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.43□□□□□ -2.34
POLR2JP52435 FAM106DP-201ENST00000586416 501 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 AC022022.2-201ENST00000602989 360 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 AC136443.5-201ENST00000603741 370 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 AC090578.1-201ENST00000604955 591 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.43□□□□□ -2.34
POLR2JP52435 MIR340-201ENST00000362125 95 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
POLR2JP52435 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.42□□□□□ -2.34
POLR2JP52435 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.42□□□□□ -2.34
POLR2JP52435 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.42□□□□□ -2.34
POLR2JP52435 SNRPEP7-201ENST00000438350 220 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 AC005094.1-201ENST00000440420 368 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.42□□□□□ -2.34
POLR2JP52435 MTND1P30-201ENST00000441241 901 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 RPL18AP17-201ENST00000455326 198 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 HMGN2P9-201ENST00000476875 229 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 RPL39P36-201ENST00000490784 156 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 RNU6-165P-201ENST00000517170 99 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.42□□□□□ -2.34
POLR2JP52435 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.42□□□□□ -2.34
POLR2JP52435 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.42□□□□□ -2.34
POLR2JP52435 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.42□□□□□ -2.34
POLR2JP52435 MIR4714-201ENST00000580728 77 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 MIR4293-201ENST00000584305 78 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 BNIP3P31-201ENST00000604515 566 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 AC105129.3-201ENST00000605455 485 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 AC083806.3-201ENST00000614016 455 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
POLR2JP52435 OR4G1P-203ENST00000641984 1631 ntBASIC0.42□□□□□ -2.34
POLR2JP52435 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
POLR2JP52435 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.41□□□□□ -2.34
POLR2JP52435 RNU6-744P-201ENST00000365557 107 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 RNU6-1316P-201ENST00000384242 108 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 MIR10B-201ENST00000385011 110 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 MTCO1P56-201ENST00000401674 224 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 AC068533.2-201ENST00000411872 306 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 RPS26P5-201ENST00000418544 335 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 AC114737.2-201ENST00000421583 173 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 FO393414.1-201ENST00000428697 1184 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.41□□□□□ -2.34
POLR2JP52435 AC099677.2-201ENST00000436385 175 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 MTCO2P25-201ENST00000447065 681 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 AC079776.3-201ENST00000450665 370 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 AC010468.3-201ENST00000508225 458 ntBASIC0.41□□□□□ -2.34
POLR2JP52435 RNU5A-4P-201ENST00000516588 111 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms