Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 FGF7P2-201ENST00000332473 296 ntBASIC1.86□□□□□ -2.11
CASP4P49662 RNU6-212P-201ENST00000362642 104 ntBASIC1.86□□□□□ -2.11
CASP4P49662 RNU4-91P-201ENST00000364778 135 ntBASIC1.86□□□□□ -2.11
CASP4P49662 Y_RNA.576-201ENST00000384781 102 ntBASIC1.86□□□□□ -2.11
CASP4P49662 CBX3P9-201ENST00000402326 552 ntBASIC1.86□□□□□ -2.11
CASP4P49662 MTND3P17-201ENST00000416968 344 ntBASIC1.86□□□□□ -2.11
CASP4P49662 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.86□□□□□ -2.11
CASP4P49662 GPR143P-201ENST00000434155 205 ntBASIC1.86□□□□□ -2.11
CASP4P49662 HMGB1P31-201ENST00000437242 427 ntBASIC1.86□□□□□ -2.11
CASP4P49662 AL445567.1-201ENST00000439121 144 ntBASIC1.86□□□□□ -2.11
CASP4P49662 DNAJC19P4-201ENST00000440115 345 ntBASIC1.86□□□□□ -2.11
CASP4P49662 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.86□□□□□ -2.11
CASP4P49662 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.86□□□□□ -2.11
CASP4P49662 AL137159.1-201ENST00000452808 512 ntBASIC1.86□□□□□ -2.11
CASP4P49662 HMGB1P35-201ENST00000503360 598 ntBASIC1.86□□□□□ -2.11
CASP4P49662 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.86□□□□□ -2.11
CASP4P49662 RNU6-250P-201ENST00000516958 103 ntBASIC1.86□□□□□ -2.11
CASP4P49662 RN7SKP256-201ENST00000517201 314 ntBASIC1.86□□□□□ -2.11
CASP4P49662 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.86□□□□□ -2.11
CASP4P49662 AP000763.2-201ENST00000540641 163 ntBASIC1.86□□□□□ -2.11
CASP4P49662 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.86□□□□□ -2.11
CASP4P49662 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.86□□□□□ -2.11
CASP4P49662 AC145350.1-201ENST00000567426 208 ntBASIC1.86□□□□□ -2.11
CASP4P49662 MIR3618-201ENST00000580330 88 ntBASIC1.86□□□□□ -2.11
CASP4P49662 AC098848.2-201ENST00000588023 330 ntBASIC1.86□□□□□ -2.11
CASP4P49662 AC002543.1-201ENST00000299783 1954 ntBASIC1.86□□□□□ -2.11
CASP4P49662 SNORD115-7-201ENST00000365306 82 ntBASIC1.85□□□□□ -2.11
CASP4P49662 Y_RNA.367-201ENST00000365544 101 ntBASIC1.85□□□□□ -2.11
CASP4P49662 MIR29B2-201ENST00000385055 81 ntBASIC1.85□□□□□ -2.11
CASP4P49662 MIR504-201ENST00000385065 83 ntBASIC1.85□□□□□ -2.11
CASP4P49662 AL627390.1-201ENST00000396055 340 ntBASIC1.85□□□□□ -2.11
CASP4P49662 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
CASP4P49662 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.85□□□□□ -2.11
CASP4P49662 ISCA1P6-201ENST00000427740 390 ntBASIC1.85□□□□□ -2.11
CASP4P49662 GAPDHP17-201ENST00000449858 1001 ntBASIC1.85□□□□□ -2.11
CASP4P49662 SNORD42A-201ENST00000459584 64 ntBASIC1.85□□□□□ -2.11
CASP4P49662 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.85□□□□□ -2.11
CASP4P49662 HMGB3P17-201ENST00000504195 649 ntBASIC1.85□□□□□ -2.11
CASP4P49662 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.85□□□□□ -2.11
CASP4P49662 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.85□□□□□ -2.11
CASP4P49662 AC104806.1-201ENST00000508720 308 ntBASIC1.85□□□□□ -2.11
CASP4P49662 RNU1-86P-201ENST00000516108 154 ntBASIC1.85□□□□□ -2.11
CASP4P49662 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.85□□□□□ -2.11
CASP4P49662 RNU1-107P-201ENST00000516617 154 ntBASIC1.85□□□□□ -2.11
CASP4P49662 RNU6-667P-201ENST00000517186 102 ntBASIC1.85□□□□□ -2.11
CASP4P49662 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.85□□□□□ -2.11
CASP4P49662 BNIP3P6-201ENST00000549284 499 ntBASIC1.85□□□□□ -2.11
CASP4P49662 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.85□□□□□ -2.11
CASP4P49662 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.85□□□□□ -2.11
CASP4P49662 AC024614.2-201ENST00000577584 372 ntBASIC1.85□□□□□ -2.11
CASP4P49662 AC022202.1-201ENST00000613515 211 ntBASIC1.85□□□□□ -2.11
CASP4P49662 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CASP4P49662 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.84□□□□□ -2.11
CASP4P49662 RNU6-1097P-201ENST00000363586 107 ntBASIC1.84□□□□□ -2.11
CASP4P49662 U3.13-201ENST00000364804 214 ntBASIC1.84□□□□□ -2.11
CASP4P49662 RNU6-108P-201ENST00000365558 107 ntBASIC1.84□□□□□ -2.11
CASP4P49662 RNU6-546P-201ENST00000383991 107 ntBASIC1.84□□□□□ -2.11
CASP4P49662 MIR764-201ENST00000390811 85 ntBASIC1.84□□□□□ -2.11
CASP4P49662 SNORA26.8-201ENST00000391306 124 ntBASIC1.84□□□□□ -2.11
CASP4P49662 RNU2-32P-201ENST00000411193 191 ntBASIC1.84□□□□□ -2.11
CASP4P49662 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.84□□□□□ -2.11
CASP4P49662 OR6C66P-201ENST00000414917 930 ntBASIC1.84□□□□□ -2.11
CASP4P49662 RPS6P15-201ENST00000431996 751 ntBASIC1.84□□□□□ -2.11
CASP4P49662 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.84□□□□□ -2.11
CASP4P49662 AL451074.3-201ENST00000437709 472 ntBASIC1.84□□□□□ -2.11
CASP4P49662 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.84□□□□□ -2.11
CASP4P49662 AL022238.1-201ENST00000442557 355 ntBASIC1.84□□□□□ -2.11
CASP4P49662 AC007677.1-201ENST00000445757 515 ntBASIC1.84□□□□□ -2.11
CASP4P49662 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.84□□□□□ -2.11
CASP4P49662 AC245102.2-201ENST00000448956 180 ntBASIC1.84□□□□□ -2.11
CASP4P49662 MTCYBP1-201ENST00000454315 1119 ntBASIC1.84□□□□□ -2.11
CASP4P49662 SNRPGP9-201ENST00000456025 225 ntBASIC1.84□□□□□ -2.11
CASP4P49662 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.84□□□□□ -2.11
CASP4P49662 RNA5SP269-201ENST00000459032 137 ntBASIC1.84□□□□□ -2.11
CASP4P49662 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.84□□□□□ -2.11
CASP4P49662 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
CASP4P49662 AC063944.3-201ENST00000609969 533 ntBASIC1.84□□□□□ -2.11
CASP4P49662 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.84□□□□□ -2.11
CASP4P49662 RMST_7.1-201ENST00000621935 268 ntBASIC1.84□□□□□ -2.11
CASP4P49662 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
CASP4P49662 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
CASP4P49662 RNU6-78P-201ENST00000362897 107 ntBASIC1.83□□□□□ -2.12
CASP4P49662 SNORD56.1-201ENST00000362913 68 ntBASIC1.83□□□□□ -2.12
CASP4P49662 RNU5E-7P-201ENST00000365290 117 ntBASIC1.83□□□□□ -2.12
CASP4P49662 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CASP4P49662 RNU6-611P-201ENST00000384276 104 ntBASIC1.83□□□□□ -2.12
CASP4P49662 RNU6-1274P-201ENST00000384557 107 ntBASIC1.83□□□□□ -2.12
CASP4P49662 RNY3P10-201ENST00000384764 102 ntBASIC1.83□□□□□ -2.12
CASP4P49662 MIR518A2-201ENST00000384966 87 ntBASIC1.83□□□□□ -2.12
CASP4P49662 MIR29C-201ENST00000385231 88 ntBASIC1.83□□□□□ -2.12
CASP4P49662 SNORA26.9-201ENST00000391322 122 ntBASIC1.83□□□□□ -2.12
CASP4P49662 AL049545.1-201ENST00000401856 572 ntBASIC1.83□□□□□ -2.12
CASP4P49662 RN7SKP284-201ENST00000411002 343 ntBASIC1.83□□□□□ -2.12
CASP4P49662 RNU6-195P-201ENST00000411352 109 ntBASIC1.83□□□□□ -2.12
CASP4P49662 BTF3L4P1-201ENST00000413813 468 ntBASIC1.83□□□□□ -2.12
CASP4P49662 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.83□□□□□ -2.12
CASP4P49662 USP9YP18-201ENST00000425912 695 ntBASIC1.83□□□□□ -2.12
CASP4P49662 AC000111.3-201ENST00000433478 193 ntBASIC1.83□□□□□ -2.12
CASP4P49662 AL353689.1-201ENST00000438895 199 ntBASIC1.83□□□□□ -2.12
CASP4P49662 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms