Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL365434.2-201ENST00000607979 234 ntBASIC0.59□□□□□ -2.31
SRP9P49458 7SK.8-201ENST00000612110 250 ntBASIC0.59□□□□□ -2.31
SRP9P49458 7SK.11-201ENST00000615477 250 ntBASIC0.59□□□□□ -2.31
SRP9P49458 RMST_4.1-201ENST00000616886 107 ntBASIC0.59□□□□□ -2.31
SRP9P49458 7SK.13-201ENST00000622040 250 ntBASIC0.59□□□□□ -2.31
SRP9P49458 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.59□□□□□ -2.31
SRP9P49458 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.59□□□□□ -2.32
SRP9P49458 AC027514.1-201ENST00000588561 1603 ntBASIC0.58□□□□□ -2.32
SRP9P49458 RNU6-212P-201ENST00000362642 104 ntBASIC0.58□□□□□ -2.32
SRP9P49458 Y_RNA.226-201ENST00000364337 114 ntBASIC0.58□□□□□ -2.32
SRP9P49458 RNU6-744P-201ENST00000365557 107 ntBASIC0.58□□□□□ -2.32
SRP9P49458 RNU6-1316P-201ENST00000384242 108 ntBASIC0.58□□□□□ -2.32
SRP9P49458 RNU6-843P-201ENST00000384454 104 ntBASIC0.58□□□□□ -2.32
SRP9P49458 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
SRP9P49458 MIR29B2-201ENST00000385055 81 ntBASIC0.58□□□□□ -2.32
SRP9P49458 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
SRP9P49458 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.58□□□□□ -2.32
SRP9P49458 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.58□□□□□ -2.32
SRP9P49458 MTCO1P3-201ENST00000429327 192 ntBASIC0.58□□□□□ -2.32
SRP9P49458 FTH1P12-201ENST00000432137 551 ntBASIC0.58□□□□□ -2.32
SRP9P49458 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.58□□□□□ -2.32
SRP9P49458 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.58□□□□□ -2.32
SRP9P49458 AC079776.3-201ENST00000450665 370 ntBASIC0.58□□□□□ -2.32
SRP9P49458 HMGN2P9-201ENST00000476875 229 ntBASIC0.58□□□□□ -2.32
SRP9P49458 RAP1BP2-201ENST00000478270 544 ntBASIC0.58□□□□□ -2.32
SRP9P49458 AC117454.1-201ENST00000491120 168 ntBASIC0.58□□□□□ -2.32
SRP9P49458 RNA5SP384-201ENST00000516615 116 ntBASIC0.58□□□□□ -2.32
SRP9P49458 RNU6-197P-201ENST00000516680 100 ntBASIC0.58□□□□□ -2.32
SRP9P49458 RNU6-1092P-201ENST00000516955 87 ntBASIC0.58□□□□□ -2.32
SRP9P49458 RNA5SP437-201ENST00000517249 129 ntBASIC0.58□□□□□ -2.32
SRP9P49458 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.58□□□□□ -2.32
SRP9P49458 AC137800.2-201ENST00000574375 120 ntBASIC0.58□□□□□ -2.32
SRP9P49458 AC136618.2-201ENST00000575091 400 ntBASIC0.58□□□□□ -2.32
SRP9P49458 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.58□□□□□ -2.32
SRP9P49458 AC126365.2-201ENST00000580630 379 ntBASIC0.58□□□□□ -2.32
SRP9P49458 BNIP3P9-201ENST00000603714 553 ntBASIC0.58□□□□□ -2.32
SRP9P49458 AC112204.3-201ENST00000623822 332 ntBASIC0.58□□□□□ -2.32
SRP9P49458 AC092656.1-203ENST00000624134 423 ntBASIC0.58□□□□□ -2.32
SRP9P49458 MIR3529-201ENST00000637713 78 ntBASIC0.58□□□□□ -2.32
SRP9P49458 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
SRP9P49458 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.58□□□□□ -2.32
SRP9P49458 MTND4P16-201ENST00000466108 1367 ntBASIC0.57□□□□□ -2.32
SRP9P49458 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SRP9P49458 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SRP9P49458 RNU6-166P-201ENST00000384371 107 ntBASIC0.57□□□□□ -2.32
SRP9P49458 RNU6-331P-201ENST00000384724 107 ntBASIC0.57□□□□□ -2.32
SRP9P49458 MIR608-201ENST00000384820 100 ntBASIC0.57□□□□□ -2.32
SRP9P49458 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
SRP9P49458 SNORA40C-201ENST00000391285 128 ntBASIC0.57□□□□□ -2.32
SRP9P49458 MTCO1P56-201ENST00000401674 224 ntBASIC0.57□□□□□ -2.32
SRP9P49458 MIR548J-201ENST00000408833 112 ntBASIC0.57□□□□□ -2.32
SRP9P49458 BX664727.1-201ENST00000416024 466 ntBASIC0.57□□□□□ -2.32
SRP9P49458 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.57□□□□□ -2.32
SRP9P49458 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.57□□□□□ -2.32
SRP9P49458 SNX2P2-201ENST00000424553 323 ntBASIC0.57□□□□□ -2.32
SRP9P49458 AL606517.1-201ENST00000446914 387 ntBASIC0.57□□□□□ -2.32
SRP9P49458 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.57□□□□□ -2.32
SRP9P49458 RPS27AP8-201ENST00000452665 445 ntBASIC0.57□□□□□ -2.32
SRP9P49458 AC009646.1-201ENST00000510455 318 ntBASIC0.57□□□□□ -2.32
SRP9P49458 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SRP9P49458 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.57□□□□□ -2.32
SRP9P49458 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.57□□□□□ -2.32
SRP9P49458 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.57□□□□□ -2.32
SRP9P49458 MTCO2P2-201ENST00000591258 225 ntBASIC0.57□□□□□ -2.32
SRP9P49458 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.57□□□□□ -2.32
SRP9P49458 AC016727.2-201ENST00000603988 621 ntBASIC0.57□□□□□ -2.32
SRP9P49458 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SRP9P49458 AL512643.1-201ENST00000635735 524 ntBASIC0.57□□□□□ -2.32
SRP9P49458 AC068647.2-201ENST00000637380 353 ntBASIC0.57□□□□□ -2.32
SRP9P49458 MTND4P21-201ENST00000453886 1357 ntBASIC0.57□□□□□ -2.32
SRP9P49458 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
SRP9P49458 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
SRP9P49458 LINC02555-201ENST00000563933 1951 ntBASIC0.56□□□□□ -2.32
SRP9P49458 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
SRP9P49458 AL117342.1-201ENST00000404861 406 ntBASIC0.56□□□□□ -2.32
SRP9P49458 AL356776.1-201ENST00000406574 447 ntBASIC0.56□□□□□ -2.32
SRP9P49458 RNU2-7P-201ENST00000410794 178 ntBASIC0.56□□□□□ -2.32
SRP9P49458 RNA5SP247-201ENST00000411181 105 ntBASIC0.56□□□□□ -2.32
SRP9P49458 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.56□□□□□ -2.32
SRP9P49458 RPL18AP17-201ENST00000455326 198 ntBASIC0.56□□□□□ -2.32
SRP9P49458 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.56□□□□□ -2.32
SRP9P49458 AC074344.1-201ENST00000512823 224 ntBASIC0.56□□□□□ -2.32
SRP9P49458 SNORA3.4-201ENST00000515969 96 ntBASIC0.56□□□□□ -2.32
SRP9P49458 RNU6-150P-201ENST00000516237 95 ntBASIC0.56□□□□□ -2.32
SRP9P49458 RNA5SP220-201ENST00000516298 104 ntBASIC0.56□□□□□ -2.32
SRP9P49458 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.56□□□□□ -2.32
SRP9P49458 AP003484.1-201ENST00000530974 250 ntBASIC0.56□□□□□ -2.32
SRP9P49458 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.56□□□□□ -2.32
SRP9P49458 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.56□□□□□ -2.32
SRP9P49458 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.56□□□□□ -2.32
SRP9P49458 AL590229.1-201ENST00000603497 542 ntBASIC0.56□□□□□ -2.32
SRP9P49458 BNIP3P31-201ENST00000604515 566 ntBASIC0.56□□□□□ -2.32
SRP9P49458 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.56□□□□□ -2.32
SRP9P49458 AC231657.1-201ENST00000624313 397 ntBASIC0.56□□□□□ -2.32
SRP9P49458 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.56□□□□□ -2.32
SRP9P49458 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.56□□□□□ -2.32
SRP9P49458 RNU5B-1-201ENST00000363286 116 ntBASIC0.55□□□□□ -2.32
SRP9P49458 MIR520A-201ENST00000384862 85 ntBASIC0.55□□□□□ -2.32
SRP9P49458 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.55□□□□□ -2.32
SRP9P49458 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms