Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 AL512360.1-201ENST00000555346 234 ntBASIC2.22□□□□□ -2.05
FNTAP49354 AL118558.2-201ENST00000556294 238 ntBASIC2.22□□□□□ -2.05
FNTAP49354 MIR548AC-201ENST00000585049 88 ntBASIC2.22□□□□□ -2.05
FNTAP49354 AC010378.1-201ENST00000619270 362 ntBASIC2.22□□□□□ -2.05
FNTAP49354 AC005609.4-201ENST00000625071 447 ntBASIC2.22□□□□□ -2.05
FNTAP49354 AC068137.3-201ENST00000639191 341 ntBASIC2.22□□□□□ -2.05
FNTAP49354 AC073869.6-201ENST00000640656 341 ntBASIC2.22□□□□□ -2.05
FNTAP49354 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
FNTAP49354 SNORA3A-201ENST00000364113 130 ntBASIC2.21□□□□□ -2.06
FNTAP49354 U3.12-201ENST00000364498 214 ntBASIC2.21□□□□□ -2.06
FNTAP49354 Y_RNA.255-201ENST00000364581 97 ntBASIC2.21□□□□□ -2.06
FNTAP49354 RNA5SP125-201ENST00000364843 120 ntBASIC2.21□□□□□ -2.06
FNTAP49354 RNU6-517P-201ENST00000384362 110 ntBASIC2.21□□□□□ -2.06
FNTAP49354 RNU6-1179P-201ENST00000384667 107 ntBASIC2.21□□□□□ -2.06
FNTAP49354 MIR518D-201ENST00000385014 87 ntBASIC2.21□□□□□ -2.06
FNTAP49354 AL445529.1-201ENST00000398713 389 ntBASIC2.21□□□□□ -2.06
FNTAP49354 SNORD23.1-201ENST00000408212 104 ntBASIC2.21□□□□□ -2.06
FNTAP49354 RNU2-3P-201ENST00000410144 191 ntBASIC2.21□□□□□ -2.06
FNTAP49354 RNU6-1068P-201ENST00000410958 103 ntBASIC2.21□□□□□ -2.06
FNTAP49354 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.21□□□□□ -2.06
FNTAP49354 PTGES3P4-201ENST00000426243 356 ntBASIC2.21□□□□□ -2.06
FNTAP49354 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.21□□□□□ -2.06
FNTAP49354 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.21□□□□□ -2.06
FNTAP49354 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.21□□□□□ -2.06
FNTAP49354 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.21□□□□□ -2.06
FNTAP49354 RNU7-180P-201ENST00000459240 63 ntBASIC2.21□□□□□ -2.06
FNTAP49354 snoU109.2-201ENST00000459316 135 ntBASIC2.21□□□□□ -2.06
FNTAP49354 RNU6-261P-201ENST00000459506 102 ntBASIC2.21□□□□□ -2.06
FNTAP49354 AC083798.1-201ENST00000472671 131 ntBASIC2.21□□□□□ -2.06
FNTAP49354 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.21□□□□□ -2.06
FNTAP49354 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.21□□□□□ -2.06
FNTAP49354 RNU1-40P-201ENST00000516816 164 ntBASIC2.21□□□□□ -2.06
FNTAP49354 RNU1-97P-201ENST00000516872 164 ntBASIC2.21□□□□□ -2.06
FNTAP49354 AP003033.1-201ENST00000527244 415 ntBASIC2.21□□□□□ -2.06
FNTAP49354 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.21□□□□□ -2.06
FNTAP49354 AP003034.1-201ENST00000534621 422 ntBASIC2.21□□□□□ -2.06
FNTAP49354 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.21□□□□□ -2.06
FNTAP49354 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.21□□□□□ -2.06
FNTAP49354 AL121821.2-201ENST00000556081 394 ntBASIC2.21□□□□□ -2.06
FNTAP49354 AL133241.1-201ENST00000556832 487 ntBASIC2.21□□□□□ -2.06
FNTAP49354 HMGB1P33-201ENST00000563485 527 ntBASIC2.21□□□□□ -2.06
FNTAP49354 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.21□□□□□ -2.06
FNTAP49354 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.21□□□□□ -2.06
FNTAP49354 AC024581.2-201ENST00000619986 252 ntBASIC2.21□□□□□ -2.06
FNTAP49354 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.21□□□□□ -2.06
FNTAP49354 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.21□□□□□ -2.06
FNTAP49354 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.21□□□□□ -2.06
FNTAP49354 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
FNTAP49354 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
FNTAP49354 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.2□□□□□ -2.06
FNTAP49354 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
FNTAP49354 SNORD14B-201ENST00000364533 90 ntBASIC2.2□□□□□ -2.06
FNTAP49354 MIR147B-201ENST00000390185 80 ntBASIC2.2□□□□□ -2.06
FNTAP49354 SNORA46.1-201ENST00000391069 153 ntBASIC2.2□□□□□ -2.06
FNTAP49354 SNORD115-47-201ENST00000391226 86 ntBASIC2.2□□□□□ -2.06
FNTAP49354 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
FNTAP49354 CYCSP33-201ENST00000414485 327 ntBASIC2.2□□□□□ -2.06
FNTAP49354 PGBD4P6-201ENST00000421501 610 ntBASIC2.2□□□□□ -2.06
FNTAP49354 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.2□□□□□ -2.06
FNTAP49354 Z98742.2-201ENST00000431564 187 ntBASIC2.2□□□□□ -2.06
FNTAP49354 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.2□□□□□ -2.06
FNTAP49354 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.2□□□□□ -2.06
FNTAP49354 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.2□□□□□ -2.06
FNTAP49354 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.2□□□□□ -2.06
FNTAP49354 SCARNA18-201ENST00000459004 134 ntBASIC2.2□□□□□ -2.06
FNTAP49354 AL163973.1-201ENST00000484753 577 ntBASIC2.2□□□□□ -2.06
FNTAP49354 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.2□□□□□ -2.06
FNTAP49354 AC011352.1-201ENST00000512300 793 ntBASIC2.2□□□□□ -2.06
FNTAP49354 RNU6-718P-201ENST00000516166 105 ntBASIC2.2□□□□□ -2.06
FNTAP49354 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.2□□□□□ -2.06
FNTAP49354 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.2□□□□□ -2.06
FNTAP49354 MIR4435-1-201ENST00000582552 80 ntBASIC2.2□□□□□ -2.06
FNTAP49354 AC080078.2-201ENST00000603766 501 ntBASIC2.2□□□□□ -2.06
FNTAP49354 AC009314.1-201ENST00000603871 304 ntBASIC2.2□□□□□ -2.06
FNTAP49354 AL138889.2-201ENST00000603883 242 ntBASIC2.2□□□□□ -2.06
FNTAP49354 AC027514.1-201ENST00000588561 1603 ntBASIC2.2□□□□□ -2.06
FNTAP49354 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
FNTAP49354 AL136360.1-201ENST00000503377 1900 ntBASIC2.19□□□□□ -2.06
FNTAP49354 RNU4-12P-201ENST00000365233 139 ntBASIC2.19□□□□□ -2.06
FNTAP49354 RNU6-395P-201ENST00000365662 106 ntBASIC2.19□□□□□ -2.06
FNTAP49354 RNU6-45P-201ENST00000384471 107 ntBASIC2.19□□□□□ -2.06
FNTAP49354 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
FNTAP49354 SNORD70.1-201ENST00000391007 85 ntBASIC2.19□□□□□ -2.06
FNTAP49354 RNU6-908P-201ENST00000410160 94 ntBASIC2.19□□□□□ -2.06
FNTAP49354 RNU6-648P-201ENST00000410190 107 ntBASIC2.19□□□□□ -2.06
FNTAP49354 RNU6-387P-201ENST00000411331 105 ntBASIC2.19□□□□□ -2.06
FNTAP49354 AL356379.1-201ENST00000414105 126 ntBASIC2.19□□□□□ -2.06
FNTAP49354 EIF4EP4-201ENST00000424916 578 ntBASIC2.19□□□□□ -2.06
FNTAP49354 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.19□□□□□ -2.06
FNTAP49354 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.19□□□□□ -2.06
FNTAP49354 AL078601.1-201ENST00000444542 271 ntBASIC2.19□□□□□ -2.06
FNTAP49354 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.19□□□□□ -2.06
FNTAP49354 AC092001.1-201ENST00000453012 261 ntBASIC2.19□□□□□ -2.06
FNTAP49354 AC087884.1-201ENST00000469738 328 ntBASIC2.19□□□□□ -2.06
FNTAP49354 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.19□□□□□ -2.06
FNTAP49354 AC105417.1-201ENST00000514691 285 ntBASIC2.19□□□□□ -2.06
FNTAP49354 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.19□□□□□ -2.06
FNTAP49354 CYCSP26-201ENST00000534107 320 ntBASIC2.19□□□□□ -2.06
FNTAP49354 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.19□□□□□ -2.06
FNTAP49354 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms