Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RNU6-970P-201ENST00000516312 107 ntBASIC1.61□□□□□ -2.15
SLC1A1P43005 AP005660.1-201ENST00000522972 293 ntBASIC1.61□□□□□ -2.15
SLC1A1P43005 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.61□□□□□ -2.15
SLC1A1P43005 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.61□□□□□ -2.15
SLC1A1P43005 RPL21P5-201ENST00000554662 472 ntBASIC1.61□□□□□ -2.15
SLC1A1P43005 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.61□□□□□ -2.15
SLC1A1P43005 MIR5692A1-201ENST00000580523 69 ntBASIC1.61□□□□□ -2.15
SLC1A1P43005 BNIP3P25-201ENST00000596023 559 ntBASIC1.61□□□□□ -2.15
SLC1A1P43005 AL158827.2-201ENST00000602494 330 ntBASIC1.61□□□□□ -2.15
SLC1A1P43005 AL121992.2-201ENST00000606262 256 ntBASIC1.61□□□□□ -2.15
SLC1A1P43005 AL159153.1-201ENST00000619688 317 ntBASIC1.61□□□□□ -2.15
SLC1A1P43005 AL691447.3-201ENST00000635020 330 ntBASIC1.61□□□□□ -2.15
SLC1A1P43005 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SLC1A1P43005 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SLC1A1P43005 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SLC1A1P43005 RNY1P12-201ENST00000364251 105 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 SNORA20.2-201ENST00000383922 131 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 MIR597-201ENST00000384968 97 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 MIR504-201ENST00000385065 83 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 MIR517C-201ENST00000385103 95 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 MIR320A-201ENST00000385302 82 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 BTF3L4P2-201ENST00000392798 346 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 RAP1BP3-201ENST00000407180 549 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 BTF3L4P1-201ENST00000413813 468 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 AC007098.1-201ENST00000420122 367 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.6□□□□□ -2.15
SLC1A1P43005 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.6□□□□□ -2.15
SLC1A1P43005 UBE2D3P4-201ENST00000441973 436 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 FDX1P2-201ENST00000450769 375 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 AC087884.1-201ENST00000469738 328 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 AC023790.1-201ENST00000482174 347 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
SLC1A1P43005 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.6□□□□□ -2.15
SLC1A1P43005 SNORA3.4-201ENST00000515969 96 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 EEF1A1P37-201ENST00000522748 715 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.6□□□□□ -2.15
SLC1A1P43005 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.6□□□□□ -2.15
SLC1A1P43005 AC018630.3-201ENST00000542637 96 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.6□□□□□ -2.15
SLC1A1P43005 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.6□□□□□ -2.15
SLC1A1P43005 AC005771.1-201ENST00000585581 349 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 AC004223.4-201ENST00000612426 332 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 RMST_7.1-201ENST00000621935 268 ntBASIC1.6□□□□□ -2.15
SLC1A1P43005 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SLC1A1P43005 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 RNU6-78P-201ENST00000362897 107 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 RNU6-179P-201ENST00000363350 107 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 RNU6-1164P-201ENST00000364428 107 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 RNA5SP212-201ENST00000391223 107 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 MIR1304-201ENST00000408243 91 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 RNU2-8P-201ENST00000410727 190 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 OR9R1P-201ENST00000412200 877 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 SRIP3-201ENST00000413200 219 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.59□□□□□ -2.15
SLC1A1P43005 TAF9P1-201ENST00000445421 515 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 AL360221.1-201ENST00000445989 335 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 TAF9P2-201ENST00000454958 515 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.59□□□□□ -2.15
SLC1A1P43005 RAP1BP2-201ENST00000478270 544 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 RPL30P1-201ENST00000488676 339 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 MTND3P25-201ENST00000509243 135 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.59□□□□□ -2.15
SLC1A1P43005 SCARNA24.1-201ENST00000516465 137 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 RNU6-685P-201ENST00000517088 95 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SLC1A1P43005 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.59□□□□□ -2.15
SLC1A1P43005 AP002453.2-201ENST00000533503 320 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 AC009977.1-201ENST00000586015 570 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SLC1A1P43005 AC073539.2-201ENST00000597113 165 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.59□□□□□ -2.15
SLC1A1P43005 AL022161.1-201ENST00000604390 213 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 AC091304.9-201ENST00000612091 226 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 AC063943.3-201ENST00000615562 356 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 RMST_4.1-201ENST00000616886 107 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 AC009159.2-201ENST00000617603 606 ntBASIC1.59□□□□□ -2.15
SLC1A1P43005 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
SLC1A1P43005 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.59□□□□□ -2.16
SLC1A1P43005 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.59□□□□□ -2.16
SLC1A1P43005 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
SLC1A1P43005 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SLC1A1P43005 Y_RNA.597-201ENST00000410463 100 ntBASIC1.58□□□□□ -2.16
SLC1A1P43005 RPS15AP10-201ENST00000432472 382 ntBASIC1.58□□□□□ -2.16
SLC1A1P43005 MTATP6P16-201ENST00000434543 526 ntBASIC1.58□□□□□ -2.16
SLC1A1P43005 AC104850.1-201ENST00000435940 476 ntBASIC1.58□□□□□ -2.16
SLC1A1P43005 HSPE1P21-201ENST00000438283 308 ntBASIC1.58□□□□□ -2.16
SLC1A1P43005 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.58□□□□□ -2.16
SLC1A1P43005 RPL39P29-201ENST00000447779 157 ntBASIC1.58□□□□□ -2.16
SLC1A1P43005 RPL30P6-201ENST00000475925 342 ntBASIC1.58□□□□□ -2.16
SLC1A1P43005 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.58□□□□□ -2.16
SLC1A1P43005 AC116562.3-201ENST00000506136 177 ntBASIC1.58□□□□□ -2.16
SLC1A1P43005 MTCYBP40-201ENST00000509390 1135 ntBASIC1.58□□□□□ -2.16
SLC1A1P43005 AC116337.1-201ENST00000509680 687 ntBASIC1.58□□□□□ -2.16
SLC1A1P43005 Y_RNA.675-201ENST00000516389 149 ntBASIC1.58□□□□□ -2.16
SLC1A1P43005 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.58□□□□□ -2.16
SLC1A1P43005 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.58□□□□□ -2.16
SLC1A1P43005 AC068587.5-201ENST00000528506 175 ntBASIC1.58□□□□□ -2.16
SLC1A1P43005 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.58□□□□□ -2.16
SLC1A1P43005 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms