Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.66□□□□□ -2.14
TNFSF9P41273 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.66□□□□□ -2.14
TNFSF9P41273 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.66□□□□□ -2.14
TNFSF9P41273 SNORD53B-201ENST00000577887 78 ntBASIC1.66□□□□□ -2.14
TNFSF9P41273 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
TNFSF9P41273 AC091304.6-201ENST00000619761 202 ntBASIC1.66□□□□□ -2.14
TNFSF9P41273 AC006927.3-201ENST00000638789 384 ntBASIC1.66□□□□□ -2.14
TNFSF9P41273 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
TNFSF9P41273 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
TNFSF9P41273 RNU4-21P-201ENST00000362802 126 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 RNU6-942P-201ENST00000363002 107 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 SNORD56.2-201ENST00000363242 71 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 RNU6-529P-201ENST00000363383 104 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 RNU5E-5P-201ENST00000365379 116 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 RNU6-297P-201ENST00000384636 107 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
TNFSF9P41273 CYCSP46-201ENST00000423569 204 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AL627311.1-201ENST00000431514 115 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 HMGB1P31-201ENST00000437242 427 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 TAF9P1-201ENST00000445421 515 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 RPS27AP8-201ENST00000452665 445 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 TAF9P2-201ENST00000454958 515 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 MTND3P7-201ENST00000474435 343 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AP000797.1-201ENST00000478870 387 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AC005840.1-201ENST00000498412 377 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AC112204.1-201ENST00000502591 103 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.65□□□□□ -2.15
TNFSF9P41273 HMGB3P17-201ENST00000504195 649 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AC091965.2-201ENST00000512324 613 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AC112206.3-201ENST00000514578 389 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AC109329.1-201ENST00000518744 317 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AP003392.2-201ENST00000527269 208 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 SUB1P3-201ENST00000564581 315 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AL022154.1-201ENST00000604698 785 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AL359821.1-201ENST00000605519 182 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AP002360.4-201ENST00000606980 481 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.65□□□□□ -2.15
TNFSF9P41273 AL512598.1-201ENST00000610158 273 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AC004908.3-201ENST00000610248 625 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.65□□□□□ -2.15
TNFSF9P41273 MIR7844-201ENST00000616161 122 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 AC019226.2-201ENST00000625973 424 ntBASIC1.65□□□□□ -2.15
TNFSF9P41273 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
TNFSF9P41273 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TNFSF9P41273 AC073343.1-201ENST00000328239 651 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 RNU6-212P-201ENST00000362642 104 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 RNU6-655P-201ENST00000362858 107 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 SNORD116-20-201ENST00000384529 92 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 AL031577.2-201ENST00000404133 280 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 RNU6-174P-201ENST00000410406 106 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 AL031779.1-201ENST00000415663 330 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFSF9P41273 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.64□□□□□ -2.15
TNFSF9P41273 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.64□□□□□ -2.15
TNFSF9P41273 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFSF9P41273 AC119618.1-201ENST00000434191 222 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 AC104850.1-201ENST00000435940 476 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 UBE2D3P4-201ENST00000441973 436 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 CALM1P1-201ENST00000442082 433 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFSF9P41273 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.64□□□□□ -2.15
TNFSF9P41273 MTCYBP1-201ENST00000454315 1119 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 RNU7-95P-201ENST00000459222 64 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 AC010587.1-201ENST00000505809 469 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 TRMT112P2-201ENST00000512910 132 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFSF9P41273 Y_RNA.673-201ENST00000516306 88 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 RNU2-46P-201ENST00000517038 113 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 AP005639.2-201ENST00000527592 928 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 AC087441.2-201ENST00000529141 262 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.64□□□□□ -2.15
TNFSF9P41273 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFSF9P41273 CR383656.8-201ENST00000549046 145 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 ADI1P3-201ENST00000549509 470 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.64□□□□□ -2.15
TNFSF9P41273 PCMTD1P2-201ENST00000565017 355 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 CLIC4P2-201ENST00000601934 717 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.64□□□□□ -2.15
TNFSF9P41273 AC091304.9-201ENST00000612091 226 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 AC022079.1-201ENST00000621546 602 ntBASIC1.64□□□□□ -2.15
TNFSF9P41273 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TNFSF9P41273 Y_RNA.22-201ENST00000362492 102 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 U8.3-201ENST00000363321 132 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 Y_RNA.226-201ENST00000364337 114 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.63□□□□□ -2.15
TNFSF9P41273 RNU6-546P-201ENST00000383991 107 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 RNU6-1274P-201ENST00000384557 107 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 RNU6-1179P-201ENST00000384667 107 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 SNORA26.8-201ENST00000391306 124 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 CISD1P1-201ENST00000393907 327 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 MIR1304-201ENST00000408243 91 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 POLHP1-201ENST00000411806 470 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.63□□□□□ -2.15
TNFSF9P41273 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TNFSF9P41273 MTND2P18-201ENST00000419962 1030 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 AC244636.1-201ENST00000421152 228 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.63□□□□□ -2.15
TNFSF9P41273 AL513185.2-201ENST00000425543 193 ntBASIC1.63□□□□□ -2.15
TNFSF9P41273 MTND5P25-201ENST00000430499 799 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms