Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RNA5SP76-201ENST00000516277 87 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 AC093027.1-201ENST00000546698 429 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 AC026371.1-201ENST00000551867 419 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 AL133393.1-201ENST00000603277 287 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 AC113139.1-201ENST00000605049 239 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 AL138726.1-201ENST00000614873 333 ntBASIC3.32□□□□□ -1.88
COL15A1P39059 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL15A1P39059 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
COL15A1P39059 Y_RNA.67-201ENST00000362870 100 ntBASIC3.31□□□□□ -1.88
COL15A1P39059 U8.2-201ENST00000363156 134 ntBASIC3.31□□□□□ -1.88
COL15A1P39059 RNU6-694P-201ENST00000364071 147 ntBASIC3.31□□□□□ -1.88
COL15A1P39059 SNORD14B-201ENST00000364533 90 ntBASIC3.31□□□□□ -1.88
COL15A1P39059 AL353729.1-201ENST00000425044 720 ntBASIC3.31□□□□□ -1.88
COL15A1P39059 MTND5P27-201ENST00000428871 1720 ntBASIC3.31□□□□□ -1.88
COL15A1P39059 AC009969.1-201ENST00000438726 172 ntBASIC3.31□□□□□ -1.88
COL15A1P39059 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.31□□□□□ -1.88
COL15A1P39059 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.31□□□□□ -1.88
COL15A1P39059 Y_RNA.635-201ENST00000459041 101 ntBASIC3.31□□□□□ -1.88
COL15A1P39059 RN7SKP24-201ENST00000515888 284 ntBASIC3.31□□□□□ -1.88
COL15A1P39059 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.31□□□□□ -1.88
COL15A1P39059 COPS8P3-201ENST00000526024 482 ntBASIC3.31□□□□□ -1.88
COL15A1P39059 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.31□□□□□ -1.88
COL15A1P39059 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.31□□□□□ -1.88
COL15A1P39059 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.31□□□□□ -1.88
COL15A1P39059 APOOP1-201ENST00000604695 592 ntBASIC3.31□□□□□ -1.88
COL15A1P39059 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.31□□□□□ -1.88
COL15A1P39059 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COL15A1P39059 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COL15A1P39059 Y_RNA.58-201ENST00000362807 102 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 Y_RNA.154-201ENST00000363624 102 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 RNU6-384P-201ENST00000364900 104 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 RNY3P1-201ENST00000365085 102 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 RNY3-201ENST00000365484 102 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 RNU6-166P-201ENST00000384371 107 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 Y_RNA.490-201ENST00000384413 102 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 SAR1AP2-201ENST00000392696 594 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 MIR888-201ENST00000401186 77 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 RPL37P10-201ENST00000412884 288 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.3□□□□□ -1.88
COL15A1P39059 AC026801.1-201ENST00000497178 464 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 RPS27P27-201ENST00000498779 255 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 AC010265.1-201ENST00000513509 211 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 RNU6-277P-201ENST00000516272 106 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.3□□□□□ -1.88
COL15A1P39059 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.3□□□□□ -1.88
COL15A1P39059 GLYCAM1-201ENST00000546596 285 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 AMZ2P1-203ENST00000565833 850 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.3□□□□□ -1.88
COL15A1P39059 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.3□□□□□ -1.88
COL15A1P39059 HSPE1P7-201ENST00000604681 321 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COL15A1P39059 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
COL15A1P39059 ZNF519P1-201ENST00000449011 1626 ntBASIC3.3□□□□□ -1.88
COL15A1P39059 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.3□□□□□ -1.88
COL15A1P39059 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
COL15A1P39059 Y_RNA.387-201ENST00000383918 102 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 RNU1-73P-201ENST00000383971 164 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 Y_RNA.509-201ENST00000384506 99 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 Y_RNA.535-201ENST00000384612 99 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.29□□□□□ -1.88
COL15A1P39059 MIR548K-201ENST00000408406 116 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 RPL26P27-201ENST00000414397 437 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.29□□□□□ -1.88
COL15A1P39059 AC099548.1-201ENST00000421443 426 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.29□□□□□ -1.88
COL15A1P39059 RPS3AP52-201ENST00000435639 297 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 RPL26P9-201ENST00000457466 433 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 snoU13.28-201ENST00000459235 104 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 AP005639.2-201ENST00000527592 928 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.29□□□□□ -1.88
COL15A1P39059 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.29□□□□□ -1.88
COL15A1P39059 AL138880.2-201ENST00000616214 239 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.29□□□□□ -1.88
COL15A1P39059 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
COL15A1P39059 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL15A1P39059 AC110774.1-201ENST00000623567 2018 ntBASIC3.29□□□□□ -1.88
COL15A1P39059 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL15A1P39059 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-37P-201ENST00000362692 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU4-79P-201ENST00000362764 141 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-11P-201ENST00000364234 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-25P-201ENST00000383873 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-1-201ENST00000383898 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-48P-201ENST00000384161 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-36P-201ENST00000384172 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-4P-201ENST00000384205 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-5P-201ENST00000384238 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-3P-201ENST00000384314 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-16P-201ENST00000384385 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-15P-201ENST00000384534 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-2-201ENST00000384627 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-29P-201ENST00000384637 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-9-201ENST00000384776 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-33P-201ENST00000384793 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 MIR592-201ENST00000384959 97 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 RNU6-1106P-201ENST00000390845 107 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.28□□□□□ -1.88
COL15A1P39059 RN7SKP192-201ENST00000411291 327 ntBASIC3.28□□□□□ -1.88
COL15A1P39059 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms