Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU6-879P-201ENST00000364328 108 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 RNU6-198P-201ENST00000384258 104 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 MIR449B-201ENST00000384995 97 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXC12P31275 RNA5SP390-201ENST00000410191 113 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 RPS15AP5-201ENST00000436276 388 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 AC244670.1-201ENST00000436879 112 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC12P31275 ABCF2P2-201ENST00000450549 296 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 AF213884.1-201ENST00000488102 463 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 Y_RNA.680-201ENST00000516441 93 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXC12P31275 MIR3186-201ENST00000577404 85 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 MIR3128-201ENST00000581957 66 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXC12P31275 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC12P31275 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.7□□□□□ -1.82
HOXC12P31275 Y_RNA.772-201ENST00000606692 102 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 AL359198.2-201ENST00000611836 194 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 AC240442.1-201ENST00000616055 283 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 AC137590.2-201ENST00000619709 240 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 MIR7702-201ENST00000621931 59 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 MIR4727-201ENST00000622232 55 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 AC039056.2-201ENST00000622261 511 ntBASIC3.7□□□□□ -1.82
HOXC12P31275 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.7□□□□□ -1.82
HOXC12P31275 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HOXC12P31275 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
HOXC12P31275 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.7□□□□□ -1.82
HOXC12P31275 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC12P31275 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
HOXC12P31275 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC12P31275 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC12P31275 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXC12P31275 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.69□□□□□ -1.82
HOXC12P31275 RNU6-212P-201ENST00000362642 104 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC12P31275 SNORA36A-201ENST00000384221 132 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 Y_RNA.477-201ENST00000384352 108 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 SNORD78.2-201ENST00000391076 69 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 SNORD66.1-201ENST00000391230 76 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 RN7SKP61-201ENST00000410642 295 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 AC078809.1-201ENST00000427601 140 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 PRSS3P4-201ENST00000453323 162 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 RPL39P38-201ENST00000467018 153 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 RPL29P14-201ENST00000495837 428 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 AC025465.3-201ENST00000510570 311 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.69□□□□□ -1.82
HOXC12P31275 AC023824.2-201ENST00000566185 400 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 MIR5571-201ENST00000577998 113 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 MIR4659A-201ENST00000580269 81 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 AC090897.2-201ENST00000581715 130 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 AC011476.5-201ENST00000615594 130 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 AL138880.2-201ENST00000616214 239 ntBASIC3.69□□□□□ -1.82
HOXC12P31275 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HOXC12P31275 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
HOXC12P31275 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HOXC12P31275 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC12P31275 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC12P31275 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC12P31275 RNU6-1159P-201ENST00000362933 107 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 RNA5SP130-201ENST00000364431 114 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 Y_RNA.257-201ENST00000364596 102 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 RNU6-926P-201ENST00000384075 107 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 RNU6-622P-201ENST00000384272 103 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 RNU6-19P-201ENST00000384718 107 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 MIR215-201ENST00000384858 110 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 Z98941.1-201ENST00000407764 100 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 RNA5SP38-201ENST00000410750 119 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 EIF1P2-201ENST00000428233 350 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 WARS2P1-201ENST00000429678 537 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 AC107626.1-201ENST00000471084 183 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 AC107222.1-201ENST00000510899 637 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 RNU6-1012P-201ENST00000516606 109 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXC12P31275 RN7SL703P-201ENST00000578485 302 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXC12P31275 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXC12P31275 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXC12P31275 MIR376A1-201ENST00000616574 68 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 AC078938.1-201ENST00000620993 318 ntBASIC3.68□□□□□ -1.82
HOXC12P31275 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXC12P31275 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXC12P31275 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HOXC12P31275 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXC12P31275 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXC12P31275 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC12P31275 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HOXC12P31275 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXC12P31275 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXC12P31275 SNORA60-201ENST00000362396 134 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 Y_RNA.84-201ENST00000363011 104 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 Y_RNA.319-201ENST00000365138 92 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXC12P31275 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
HOXC12P31275 MT-TR-201ENST00000387439 65 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 SNORD115-46-201ENST00000390982 71 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 AL079342.1-201ENST00000401460 267 ntBASIC3.67□□□□□ -1.82
HOXC12P31275 RNU2-20P-201ENST00000410425 191 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms