Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 C1DP4-201ENST00000455429 424 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 SNORD13-201ENST00000459299 104 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXA9P31269 AC107032.1-201ENST00000485945 480 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXA9P31269 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AC008526.1-201ENST00000509149 338 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXA9P31269 RNU6-581P-201ENST00000516214 105 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXA9P31269 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXA9P31269 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXA9P31269 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
HOXA9P31269 AC005034.5-201ENST00000604219 466 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AC091152.3-201ENST00000604227 325 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 Z84480.1-201ENST00000605131 311 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AC109347.2-201ENST00000610220 349 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AC011939.3-201ENST00000613686 466 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AC024940.5-201ENST00000622889 474 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AC011155.2-201ENST00000623202 216 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXA9P31269 MIR3199-2-201ENST00000636243 86 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.89□□□□□ -2.11
HOXA9P31269 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HOXA9P31269 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HOXA9P31269 Y_RNA.4-201ENST00000362333 112 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 RNU6-1097P-201ENST00000363586 107 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 RNU6-457P-201ENST00000363999 107 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HOXA9P31269 MIR578-201ENST00000384828 96 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 EEF1A1P40-201ENST00000412883 573 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXA9P31269 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXA9P31269 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXA9P31269 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 HMGB3P17-201ENST00000504195 649 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXA9P31269 RNU6-1053P-201ENST00000515930 101 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 SNORA31.6-201ENST00000516241 130 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 SNORD27.1-201ENST00000516319 72 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 RNU2-44P-201ENST00000516795 194 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 RNU6-410P-201ENST00000517006 107 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 RNU6-685P-201ENST00000517088 95 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXA9P31269 AL121821.2-201ENST00000556081 394 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 MIR4775-201ENST00000581168 75 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 AL391813.1-201ENST00000603098 260 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 AC008121.1-201ENST00000603244 268 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 MIR6134-201ENST00000617606 109 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 U4atac.1-201ENST00000618345 95 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 AC072046.2-201ENST00000618366 268 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 AC138649.3-201ENST00000622154 254 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 DUXAP9-208ENST00000622815 614 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 AL359740.1-201ENST00000624340 592 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXA9P31269 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HOXA9P31269 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HOXA9P31269 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HOXA9P31269 MTND5P17-201ENST00000418405 1603 ntBASIC1.88□□□□□ -2.11
HOXA9P31269 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
HOXA9P31269 RNU6-179P-201ENST00000363350 107 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 Y_RNA.159-201ENST00000363674 87 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 SNORA62.1-201ENST00000364287 154 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 RNU6-898P-201ENST00000365627 104 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 RNU6-1119P-201ENST00000384349 108 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 RNU6-456P-201ENST00000384493 107 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HOXA9P31269 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXA9P31269 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.87□□□□□ -2.11
HOXA9P31269 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXA9P31269 RPS3AP44-201ENST00000425466 790 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXA9P31269 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXA9P31269 USP9YP14-201ENST00000430663 563 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.87□□□□□ -2.11
HOXA9P31269 AC000111.3-201ENST00000433478 193 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 MTCO3P5-201ENST00000433620 714 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 AC079781.2-201ENST00000446424 169 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 AL360271.2-201ENST00000447710 161 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 AL354685.2-201ENST00000448218 1447 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXA9P31269 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXA9P31269 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXA9P31269 MTCO2P18-201ENST00000457151 658 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXA9P31269 AC112206.3-201ENST00000514578 389 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXA9P31269 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.87□□□□□ -2.11
HOXA9P31269 OR5AL2P-201ENST00000532185 920 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXA9P31269 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXA9P31269 LINC00933-203ENST00000559812 219 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 AC025678.1-201ENST00000567861 338 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 AL391840.1-201ENST00000571144 367 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 MIR3126-201ENST00000577443 74 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 MIR4782-201ENST00000577987 79 ntBASIC1.87□□□□□ -2.11
HOXA9P31269 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.87□□□□□ -2.11
HOXA9P31269 AL109918.3-201ENST00000603072 338 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms