Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CNGA1P29973 MTND4P29-201ENST00000503122 1372 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 MIR30E-201ENST00000362104 92 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 RNU6-301P-201ENST00000384277 107 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 RNU6-933P-201ENST00000384424 107 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 MIR147B-201ENST00000390185 80 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 AL031121.1-201ENST00000406553 254 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 AL513475.1-201ENST00000406602 315 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 RNU6-370P-201ENST00000411008 104 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 AC124916.1-201ENST00000444020 547 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 AL441985.1-201ENST00000457727 251 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 AC021205.2-201ENST00000480069 347 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 AC008885.1-201ENST00000514930 301 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 MIR2276-201ENST00000516886 89 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.67□□□□□ -1.82
CNGA1P29973 IGHV3-76-201ENST00000522465 295 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.67□□□□□ -1.82
CNGA1P29973 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.67□□□□□ -1.82
CNGA1P29973 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.67□□□□□ -1.82
CNGA1P29973 AC116312.1-201ENST00000606841 314 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 AC107294.3-201ENST00000609211 526 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 AC241585.2-209ENST00000638217 143 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CNGA1P29973 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.67□□□□□ -1.82
CNGA1P29973 AC017071.1-201ENST00000564407 2204 ntBASIC3.67□□□□□ -1.82
CNGA1P29973 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.67□□□□□ -1.82
CNGA1P29973 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNGA1P29973 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.66□□□□□ -1.82
CNGA1P29973 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CNGA1P29973 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNGA1P29973 Y_RNA.58-201ENST00000362807 102 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 Y_RNA.154-201ENST00000363624 102 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 RNY3P1-201ENST00000365085 102 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 RNY3-201ENST00000365484 102 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 Y_RNA.490-201ENST00000384413 102 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 RNU6-790P-201ENST00000384479 105 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 Y_RNA.535-201ENST00000384612 99 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 AL356968.1-201ENST00000416622 474 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 AC022018.1-201ENST00000430685 241 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 USP9YP30-201ENST00000430729 455 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 AC107083.1-201ENST00000439643 279 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.66□□□□□ -1.82
CNGA1P29973 AC012308.1-201ENST00000451232 178 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.66□□□□□ -1.82
CNGA1P29973 RPS29P27-201ENST00000463711 170 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 CENPBD1P1-201ENST00000464061 469 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 MRPS36P2-201ENST00000512569 299 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 RNA5SP380-201ENST00000517190 98 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.66□□□□□ -1.82
CNGA1P29973 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.66□□□□□ -1.82
CNGA1P29973 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.66□□□□□ -1.82
CNGA1P29973 AC090897.2-201ENST00000581715 130 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 UBL5P2-201ENST00000583788 219 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 RPL12P50-201ENST00000603116 116 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 AL133393.1-201ENST00000603277 287 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 AP001836.1-201ENST00000604675 523 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 AC024581.2-201ENST00000619986 252 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 AC099654.7-201ENST00000635788 2127 ntBASIC3.66□□□□□ -1.82
CNGA1P29973 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNGA1P29973 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CNGA1P29973 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNGA1P29973 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CNGA1P29973 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CNGA1P29973 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.65□□□□□ -1.82
CNGA1P29973 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.65□□□□□ -1.83
CNGA1P29973 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CNGA1P29973 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CNGA1P29973 U8.8-201ENST00000365399 135 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 AP002088.1-201ENST00000382740 395 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 RNU6-692P-201ENST00000384496 107 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 SNORD116-29-201ENST00000384516 83 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 RNA5SP390-201ENST00000410191 113 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 AP000275.1-201ENST00000411943 390 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.65□□□□□ -1.83
CNGA1P29973 BX679664.1-201ENST00000434429 253 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.65□□□□□ -1.83
CNGA1P29973 SNORD19B-201ENST00000459623 84 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 RPS29P12-201ENST00000460178 152 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.65□□□□□ -1.83
CNGA1P29973 AC114801.2-201ENST00000503825 781 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 AP005902.1-201ENST00000521358 186 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.65□□□□□ -1.83
CNGA1P29973 APOOP3-201ENST00000536787 586 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 HPRT1P3-201ENST00000539521 576 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.65□□□□□ -1.83
CNGA1P29973 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.65□□□□□ -1.83
CNGA1P29973 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.65□□□□□ -1.83
CNGA1P29973 AC008739.2-201ENST00000597006 317 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 AC018889.1-201ENST00000605372 397 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 AP000654.2-201ENST00000605633 586 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 MIR3976-201ENST00000606807 139 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 MIR8076-201ENST00000611401 83 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 uc_338.14-201ENST00000613162 166 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 AL079305.1-201ENST00000623159 3008 ntBASIC3.65□□□□□ -1.83
CNGA1P29973 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNGA1P29973 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNGA1P29973 KPNA2P1-201ENST00000458289 1591 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms