Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AF235103.2-201ENST00000525753 346 ntBASIC2.73□□□□□ -1.97
ABCD3P28288 AC022080.3-201ENST00000544433 482 ntBASIC2.73□□□□□ -1.97
ABCD3P28288 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
ABCD3P28288 AC060780.3-201ENST00000589464 80 ntBASIC2.73□□□□□ -1.97
ABCD3P28288 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.73□□□□□ -1.97
ABCD3P28288 CTHRC1P1-201ENST00000605383 469 ntBASIC2.73□□□□□ -1.97
ABCD3P28288 AC005000.2-201ENST00000605468 310 ntBASIC2.73□□□□□ -1.97
ABCD3P28288 MIR5739-201ENST00000619803 80 ntBASIC2.73□□□□□ -1.97
ABCD3P28288 AC100810.6-201ENST00000638068 285 ntBASIC2.73□□□□□ -1.97
ABCD3P28288 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.73□□□□□ -1.97
ABCD3P28288 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
ABCD3P28288 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
ABCD3P28288 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
ABCD3P28288 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
ABCD3P28288 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.73□□□□□ -1.97
ABCD3P28288 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ABCD3P28288 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.72□□□□□ -1.97
ABCD3P28288 RNA5SP240-201ENST00000365355 128 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
ABCD3P28288 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
ABCD3P28288 AL162578.1-201ENST00000406202 378 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 RNU2-63P-201ENST00000410792 194 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 AC003685.2-201ENST00000422795 395 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 AC008267.5-201ENST00000424928 265 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 CYP2C59P-201ENST00000457790 269 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 U8.21-201ENST00000459536 136 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 AC073901.1-201ENST00000462471 408 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.72□□□□□ -1.97
ABCD3P28288 AL121594.1-201ENST00000475906 575 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 RPS29P2-201ENST00000479278 136 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.72□□□□□ -1.97
ABCD3P28288 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.72□□□□□ -1.97
ABCD3P28288 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.72□□□□□ -1.97
ABCD3P28288 RNU6-358P-201ENST00000516564 75 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 AC107016.2-201ENST00000547968 190 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 AC026371.1-201ENST00000551867 419 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 ELOCP5-201ENST00000604924 333 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ABCD3P28288 AC241585.2-209ENST00000638217 143 ntBASIC2.72□□□□□ -1.97
ABCD3P28288 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ABCD3P28288 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
ABCD3P28288 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
ABCD3P28288 RNU6-1141P-201ENST00000364520 107 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 SNORA9.2-201ENST00000365361 133 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ABCD3P28288 MIR634-201ENST00000385208 97 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 Z92545.1-201ENST00000411782 234 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.71□□□□□ -1.98
ABCD3P28288 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.71□□□□□ -1.98
ABCD3P28288 VN1R36P-201ENST00000414936 291 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 AL513185.2-201ENST00000425543 193 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.71□□□□□ -1.98
ABCD3P28288 AC140059.1-201ENST00000489238 361 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 AC083906.5-201ENST00000503722 328 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.71□□□□□ -1.98
ABCD3P28288 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.71□□□□□ -1.98
ABCD3P28288 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.71□□□□□ -1.98
ABCD3P28288 AC104576.1-201ENST00000524225 88 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 AP000889.1-201ENST00000530968 660 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.71□□□□□ -1.98
ABCD3P28288 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.71□□□□□ -1.98
ABCD3P28288 RPL30P11-203ENST00000598995 310 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 AC093732.2-201ENST00000607950 274 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 AC064836.2-201ENST00000609491 462 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 AC093913.1-201ENST00000614178 329 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.71□□□□□ -1.98
ABCD3P28288 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ABCD3P28288 AC009033.1-201ENST00000624279 431 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ABCD3P28288 AP000560.1-201ENST00000624150 1937 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.71□□□□□ -1.98
ABCD3P28288 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.71□□□□□ -1.98
ABCD3P28288 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ABCD3P28288 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.71□□□□□ -1.98
ABCD3P28288 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.71□□□□□ -1.98
ABCD3P28288 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
ABCD3P28288 RNU1-72P-201ENST00000362976 153 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 RNU1-109P-201ENST00000383960 147 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 RNU6-692P-201ENST00000384496 107 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 RNU6-851P-201ENST00000384565 107 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 SNORA44-201ENST00000384584 132 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 CBX3P9-201ENST00000402326 552 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.7□□□□□ -1.98
ABCD3P28288 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.7□□□□□ -1.98
ABCD3P28288 MTND1P2-201ENST00000430604 821 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 AL139415.2-201ENST00000431968 163 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 MTCO3P18-201ENST00000440206 761 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 CKS1BP2-201ENST00000497342 240 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 AC114801.2-201ENST00000503825 781 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 AC092436.3-201ENST00000511788 257 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 RNU6-256P-201ENST00000516747 97 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.7□□□□□ -1.98
ABCD3P28288 SCOCP1-201ENST00000554676 349 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 AC018638.8-201ENST00000588755 281 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 AP001836.1-201ENST00000604675 523 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 BNIP3P10-201ENST00000605360 577 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 RPL23AP88-201ENST00000605759 454 ntBASIC2.7□□□□□ -1.98
ABCD3P28288 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
ABCD3P28288 AC008121.3-201ENST00000618726 433 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms