Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC098614.4-201ENST00000607601 462 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 U6.42-201ENST00000618440 107 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 RMST_7.1-201ENST00000621935 268 ntBASIC1.39□□□□□ -2.19
HLA-DMAP28067 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DMAP28067 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.39□□□□□ -2.19
HLA-DMAP28067 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DMAP28067 ZNF680P1-201ENST00000436625 1469 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 RNU4-21P-201ENST00000362802 126 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 SNORD115-7-201ENST00000365306 82 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 RNU2-3P-201ENST00000410144 191 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 CYCSP33-201ENST00000414485 327 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DMAP28067 MTCYBP5-201ENST00000423752 1135 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DMAP28067 AC009961.2-201ENST00000435771 251 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 MTND1P30-201ENST00000441241 901 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.38□□□□□ -2.19
HLA-DMAP28067 AL357134.1-201ENST00000445848 426 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 GAPDHP17-201ENST00000449858 1001 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 ART2BP-201ENST00000453501 499 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DMAP28067 AL353752.1-201ENST00000454946 260 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 HMGB1P30-201ENST00000492455 606 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DMAP28067 AP000763.2-201ENST00000540641 163 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.38□□□□□ -2.19
HLA-DMAP28067 BNIP3P8-201ENST00000597863 560 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 AC078795.2-201ENST00000602835 1252 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 AC073410.2-201ENST00000603240 332 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 CYP2C61P-201ENST00000604072 290 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.38□□□□□ -2.19
HLA-DMAP28067 AC012360.2-201ENST00000609349 391 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 Z82243.1-201ENST00000609432 473 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 AC087683.2-201ENST00000611384 326 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 AC087241.4-201ENST00000612441 480 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 uc_338.15-201ENST00000615470 191 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 AL590808.1-201ENST00000618696 141 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 AC011155.2-201ENST00000623202 216 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 AC110994.2-201ENST00000635481 492 ntBASIC1.38□□□□□ -2.19
HLA-DMAP28067 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
HLA-DMAP28067 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HLA-DMAP28067 RNU6-1010P-201ENST00000362757 107 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 SNORD56.1-201ENST00000362913 68 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 SNORD115-3-201ENST00000363100 82 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 RNU6-944P-201ENST00000364023 107 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 RNU1-42P-201ENST00000364033 160 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
HLA-DMAP28067 RNU6-116P-201ENST00000384042 109 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 Y_RNA.500-201ENST00000384466 111 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 RNU6-1274P-201ENST00000384557 107 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 RNU11-3P-201ENST00000391111 133 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 SNORA3.2-201ENST00000408221 125 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMAP28067 MTND2P18-201ENST00000419962 1030 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 AC007098.1-201ENST00000420122 367 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 BX510359.4-201ENST00000423750 193 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.37□□□□□ -2.19
HLA-DMAP28067 MTCO3P5-201ENST00000433620 714 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 HMGB1P31-201ENST00000437242 427 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMAP28067 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMAP28067 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMAP28067 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMAP28067 HMGN2P23-201ENST00000456759 269 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMAP28067 AC116562.3-201ENST00000506136 177 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.37□□□□□ -2.19
HLA-DMAP28067 AC008549.1-201ENST00000512900 643 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 RNU6-685P-201ENST00000517088 95 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 HSPE1P18-201ENST00000517602 280 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 AC109329.1-201ENST00000518744 317 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMAP28067 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.37□□□□□ -2.19
HLA-DMAP28067 AC068587.5-201ENST00000528506 175 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 AP002453.2-201ENST00000533503 320 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.37□□□□□ -2.19
HLA-DMAP28067 Z99289.3-201ENST00000605586 594 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 AC008250.2-201ENST00000615261 205 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 MIR3529-201ENST00000637713 78 ntBASIC1.37□□□□□ -2.19
HLA-DMAP28067 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
HLA-DMAP28067 MIR424-201ENST00000362227 98 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 RNU6-74P-201ENST00000384235 107 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 SNORD14D-201ENST00000384390 87 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 MIR1-2-201ENST00000384961 85 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 SNORA40.3-201ENST00000390964 122 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 MIR1262-201ENST00000408276 93 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 RN7SKP101-201ENST00000411376 320 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DMAP28067 MTND5P25-201ENST00000430499 799 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 RPL31P35-201ENST00000431058 377 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC073614.1-201ENST00000438690 650 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AL031667.1-201ENST00000440222 725 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AL121594.1-201ENST00000475906 575 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 RPL23AP63-201ENST00000498752 471 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC114801.2-201ENST00000503825 781 ntBASIC1.36□□□□□ -2.19
HLA-DMAP28067 AC021146.2-201ENST00000504736 556 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms