Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC074344.1-201ENST00000512823 224 ntBASIC2.11□□□□□ -2.07
GDF1P27539 AC008549.1-201ENST00000512900 643 ntBASIC2.11□□□□□ -2.07
GDF1P27539 SNORA31.18-201ENST00000517043 134 ntBASIC2.11□□□□□ -2.07
GDF1P27539 SNORA25.17-201ENST00000517184 124 ntBASIC2.11□□□□□ -2.07
GDF1P27539 CENPUP1-201ENST00000526649 1202 ntBASIC2.11□□□□□ -2.07
GDF1P27539 AC091152.3-201ENST00000604227 325 ntBASIC2.11□□□□□ -2.07
GDF1P27539 AC087045.1-201ENST00000605856 382 ntBASIC2.11□□□□□ -2.07
GDF1P27539 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.11□□□□□ -2.07
GDF1P27539 DISC2.1-201ENST00000612827 205 ntBASIC2.11□□□□□ -2.07
GDF1P27539 HMGB1P24-202ENST00000615653 685 ntBASIC2.11□□□□□ -2.07
GDF1P27539 AL031601.2-202ENST00000622650 282 ntBASIC2.11□□□□□ -2.07
GDF1P27539 MIR6873-201ENST00000622788 63 ntBASIC2.11□□□□□ -2.07
GDF1P27539 AC010889.1-201ENST00000566193 2666 ntBASIC2.11□□□□□ -2.07
GDF1P27539 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
GDF1P27539 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
GDF1P27539 ADAM3A-203ENST00000461344 2157 ntBASIC2.1□□□□□ -2.07
GDF1P27539 OR4G1P-203ENST00000641984 1631 ntBASIC2.1□□□□□ -2.07
GDF1P27539 AC131280.1-202ENST00000624067 4211 ntBASIC2.1□□□□□ -2.07
GDF1P27539 Y_RNA.231-201ENST00000364358 102 ntBASIC2.1□□□□□ -2.07
GDF1P27539 RNU4-66P-201ENST00000365199 138 ntBASIC2.1□□□□□ -2.07
GDF1P27539 RNU6-72P-201ENST00000384285 79 ntBASIC2.1□□□□□ -2.07
GDF1P27539 SNORA3.2-201ENST00000408221 125 ntBASIC2.1□□□□□ -2.07
GDF1P27539 RNA5SP425-201ENST00000410336 112 ntBASIC2.1□□□□□ -2.07
GDF1P27539 Z98742.3-201ENST00000418637 326 ntBASIC2.1□□□□□ -2.07
GDF1P27539 PGBD4P6-201ENST00000421501 610 ntBASIC2.1□□□□□ -2.07
GDF1P27539 OOSP1P1-201ENST00000423265 274 ntBASIC2.1□□□□□ -2.07
GDF1P27539 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
GDF1P27539 SRIP2-201ENST00000428470 166 ntBASIC2.1□□□□□ -2.07
GDF1P27539 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.1□□□□□ -2.07
GDF1P27539 RPS15AP28-201ENST00000435088 386 ntBASIC2.1□□□□□ -2.07
GDF1P27539 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.1□□□□□ -2.07
GDF1P27539 AL121601.2-201ENST00000438019 707 ntBASIC2.1□□□□□ -2.07
GDF1P27539 CALM1P1-201ENST00000442082 433 ntBASIC2.1□□□□□ -2.07
GDF1P27539 AL353705.4-201ENST00000449661 238 ntBASIC2.1□□□□□ -2.07
GDF1P27539 AL139109.1-201ENST00000455491 297 ntBASIC2.1□□□□□ -2.07
GDF1P27539 snoU109.2-201ENST00000459316 135 ntBASIC2.1□□□□□ -2.07
GDF1P27539 HMGB1P30-201ENST00000492455 606 ntBASIC2.1□□□□□ -2.07
GDF1P27539 RPL23AP49-201ENST00000492925 468 ntBASIC2.1□□□□□ -2.07
GDF1P27539 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.1□□□□□ -2.07
GDF1P27539 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.1□□□□□ -2.07
GDF1P27539 SNORD60.2-201ENST00000516883 86 ntBASIC2.1□□□□□ -2.07
GDF1P27539 AC078814.3-201ENST00000553036 491 ntBASIC2.1□□□□□ -2.07
GDF1P27539 AL121821.2-201ENST00000556081 394 ntBASIC2.1□□□□□ -2.07
GDF1P27539 AC005498.1-201ENST00000592125 465 ntBASIC2.1□□□□□ -2.07
GDF1P27539 AL356280.1-201ENST00000603614 379 ntBASIC2.1□□□□□ -2.07
GDF1P27539 RNU6-89P-201ENST00000606519 100 ntBASIC2.1□□□□□ -2.07
GDF1P27539 AC002044.1-201ENST00000606707 158 ntBASIC2.1□□□□□ -2.07
GDF1P27539 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
GDF1P27539 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.1□□□□□ -2.07
GDF1P27539 MIR3199-2-201ENST00000636243 86 ntBASIC2.1□□□□□ -2.07
GDF1P27539 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
GDF1P27539 ZNF658B-202ENST00000615961 3375 ntBASIC2.1□□□□□ -2.07
GDF1P27539 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
GDF1P27539 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
GDF1P27539 Y_RNA.295-201ENST00000364918 102 ntBASIC2.09□□□□□ -2.07
GDF1P27539 RNU1-51P-201ENST00000365345 176 ntBASIC2.09□□□□□ -2.07
GDF1P27539 SNORA70B-201ENST00000384210 135 ntBASIC2.09□□□□□ -2.07
GDF1P27539 Y_RNA.453-201ENST00000384223 109 ntBASIC2.09□□□□□ -2.07
GDF1P27539 SNORA80E-201ENST00000384744 137 ntBASIC2.09□□□□□ -2.07
GDF1P27539 SNORD37.1-201ENST00000390968 65 ntBASIC2.09□□□□□ -2.07
GDF1P27539 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.09□□□□□ -2.07
GDF1P27539 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.09□□□□□ -2.07
GDF1P27539 U3.37-201ENST00000408528 213 ntBASIC2.09□□□□□ -2.07
GDF1P27539 MIR1277-201ENST00000408536 78 ntBASIC2.09□□□□□ -2.07
GDF1P27539 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.09□□□□□ -2.07
GDF1P27539 SNRPEP10-201ENST00000420249 274 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.09□□□□□ -2.07
GDF1P27539 AL356320.1-201ENST00000429616 163 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.09□□□□□ -2.07
GDF1P27539 BTF3P15-201ENST00000455606 336 ntBASIC2.09□□□□□ -2.07
GDF1P27539 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.09□□□□□ -2.07
GDF1P27539 RPL21P99-201ENST00000480369 423 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AC069439.1-201ENST00000494739 167 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AC091885.1-201ENST00000506658 268 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AC116655.1-201ENST00000508324 901 ntBASIC2.09□□□□□ -2.07
GDF1P27539 Y_RNA.687-201ENST00000516558 91 ntBASIC2.09□□□□□ -2.07
GDF1P27539 IGLV3-17-201ENST00000519099 244 ntBASIC2.09□□□□□ -2.07
GDF1P27539 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.09□□□□□ -2.07
GDF1P27539 AC121758.2-201ENST00000553271 193 ntBASIC2.09□□□□□ -2.07
GDF1P27539 MIR3616-201ENST00000584070 92 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AL391813.1-201ENST00000603098 260 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AC123912.5-201ENST00000605470 343 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.09□□□□□ -2.07
GDF1P27539 AC104458.1-201ENST00000608243 463 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AC092807.2-201ENST00000609367 243 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AC068944.2-201ENST00000610373 403 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AC245884.12-201ENST00000615364 59 ntBASIC2.09□□□□□ -2.07
GDF1P27539 U6atac.1-201ENST00000616025 117 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AC103705.1-201ENST00000619013 241 ntBASIC2.09□□□□□ -2.07
GDF1P27539 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AC026585.1-201ENST00000619582 524 ntBASIC2.09□□□□□ -2.07
GDF1P27539 AL160394.1-201ENST00000624765 724 ntBASIC2.09□□□□□ -2.07
GDF1P27539 MIR203B-201ENST00000636080 86 ntBASIC2.09□□□□□ -2.07
GDF1P27539 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.08
GDF1P27539 AC004520.1-201ENST00000608362 1413 ntBASIC2.08□□□□□ -2.08
GDF1P27539 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
GDF1P27539 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
GDF1P27539 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
GDF1P27539 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms