Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC127459.3-201ENST00000624328 466 ntBASIC4.66□□□□□ -1.66
RFX1P22670 AC140479.6-201ENST00000633535 357 ntBASIC4.66□□□□□ -1.66
RFX1P22670 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFX1P22670 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.66□□□□□ -1.66
RFX1P22670 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFX1P22670 AP001486.2-201ENST00000561652 5113 ntBASIC4.66□□□□□ -1.66
RFX1P22670 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.66□□□□□ -1.66
RFX1P22670 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.66□□□□□ -1.66
RFX1P22670 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFX1P22670 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
RFX1P22670 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
RFX1P22670 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RFX1P22670 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RFX1P22670 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
RFX1P22670 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.65□□□□□ -1.66
RFX1P22670 SNORD66.1-201ENST00000391230 76 ntBASIC4.65□□□□□ -1.67
RFX1P22670 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.65□□□□□ -1.67
RFX1P22670 HLFP1-201ENST00000402375 499 ntBASIC4.65□□□□□ -1.67
RFX1P22670 AL390729.2-201ENST00000416137 156 ntBASIC4.65□□□□□ -1.67
RFX1P22670 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.65□□□□□ -1.67
RFX1P22670 HLA-N-201ENST00000437516 135 ntBASIC4.65□□□□□ -1.67
RFX1P22670 AL353748.1-201ENST00000440753 474 ntBASIC4.65□□□□□ -1.67
RFX1P22670 snoU13.6-201ENST00000458785 104 ntBASIC4.65□□□□□ -1.67
RFX1P22670 RN7SL542P-201ENST00000467147 294 ntBASIC4.65□□□□□ -1.67
RFX1P22670 RPL35AP15-201ENST00000468042 339 ntBASIC4.65□□□□□ -1.67
RFX1P22670 SEPT14P8-201ENST00000508026 178 ntBASIC4.65□□□□□ -1.67
RFX1P22670 AL592156.1-201ENST00000508758 304 ntBASIC4.65□□□□□ -1.67
RFX1P22670 SERF1AP1-201ENST00000514575 187 ntBASIC4.65□□□□□ -1.67
RFX1P22670 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.65□□□□□ -1.67
RFX1P22670 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.65□□□□□ -1.67
RFX1P22670 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.65□□□□□ -1.67
RFX1P22670 AC105137.2-201ENST00000569073 466 ntBASIC4.65□□□□□ -1.67
RFX1P22670 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RFX1P22670 AL356575.1-201ENST00000603008 283 ntBASIC4.65□□□□□ -1.67
RFX1P22670 AL078605.1-201ENST00000603529 500 ntBASIC4.65□□□□□ -1.67
RFX1P22670 AC113403.1-201ENST00000604910 193 ntBASIC4.65□□□□□ -1.67
RFX1P22670 AL365434.2-201ENST00000607979 234 ntBASIC4.65□□□□□ -1.67
RFX1P22670 AC005520.5-201ENST00000613926 164 ntBASIC4.65□□□□□ -1.67
RFX1P22670 RNA5SP196-201ENST00000625967 102 ntBASIC4.65□□□□□ -1.67
RFX1P22670 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
RFX1P22670 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFX1P22670 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.65□□□□□ -1.67
RFX1P22670 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFX1P22670 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFX1P22670 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RFX1P22670 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.64□□□□□ -1.67
RFX1P22670 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFX1P22670 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RFX1P22670 RNU6-1010P-201ENST00000362757 107 ntBASIC4.64□□□□□ -1.67
RFX1P22670 Y_RNA.230-201ENST00000364348 109 ntBASIC4.64□□□□□ -1.67
RFX1P22670 RNU6-750P-201ENST00000390946 107 ntBASIC4.64□□□□□ -1.67
RFX1P22670 RNU6-1001P-201ENST00000411265 100 ntBASIC4.64□□□□□ -1.67
RFX1P22670 AC019205.3-201ENST00000424573 156 ntBASIC4.64□□□□□ -1.67
RFX1P22670 COX6B1P7-201ENST00000430845 235 ntBASIC4.64□□□□□ -1.67
RFX1P22670 AL358232.1-201ENST00000448030 501 ntBASIC4.64□□□□□ -1.67
RFX1P22670 SUMO1P2-201ENST00000452524 304 ntBASIC4.64□□□□□ -1.67
RFX1P22670 SNORA67.7-201ENST00000516664 135 ntBASIC4.64□□□□□ -1.67
RFX1P22670 RNA5SP143-201ENST00000516936 115 ntBASIC4.64□□□□□ -1.67
RFX1P22670 MIR7702-201ENST00000621931 59 ntBASIC4.64□□□□□ -1.67
RFX1P22670 MIR492-201ENST00000638676 116 ntBASIC4.64□□□□□ -1.67
RFX1P22670 AC106871.1-201ENST00000568324 3102 ntBASIC4.64□□□□□ -1.67
RFX1P22670 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.64□□□□□ -1.67
RFX1P22670 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFX1P22670 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RFX1P22670 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFX1P22670 AL079305.1-201ENST00000623159 3008 ntBASIC4.64□□□□□ -1.67
RFX1P22670 AC011266.1-201ENST00000624119 3569 ntBASIC4.64□□□□□ -1.67
RFX1P22670 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFX1P22670 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.64□□□□□ -1.67
RFX1P22670 Z82217.1-201ENST00000625157 8149 ntBASIC4.63□□□□□ -1.67
RFX1P22670 AC010889.1-201ENST00000566193 2666 ntBASIC4.63□□□□□ -1.67
RFX1P22670 RNU6-525P-201ENST00000363685 104 ntBASIC4.63□□□□□ -1.67
RFX1P22670 RNA5SP513-201ENST00000364648 118 ntBASIC4.63□□□□□ -1.67
RFX1P22670 Y_RNA.269-201ENST00000364685 89 ntBASIC4.63□□□□□ -1.67
RFX1P22670 MIR200C-201ENST00000384980 68 ntBASIC4.63□□□□□ -1.67
RFX1P22670 PTMAP2-201ENST00000397627 327 ntBASIC4.63□□□□□ -1.67
RFX1P22670 AL033519.2-201ENST00000403958 392 ntBASIC4.63□□□□□ -1.67
RFX1P22670 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.63□□□□□ -1.67
RFX1P22670 SUMO1P3-201ENST00000439961 304 ntBASIC4.63□□□□□ -1.67
RFX1P22670 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.63□□□□□ -1.67
RFX1P22670 RPL23AP81-201ENST00000455252 467 ntBASIC4.63□□□□□ -1.67
RFX1P22670 HMGN2P7-201ENST00000456186 273 ntBASIC4.63□□□□□ -1.67
RFX1P22670 SNRPGP3-201ENST00000469405 227 ntBASIC4.63□□□□□ -1.67
RFX1P22670 AC090525.1-201ENST00000479116 478 ntBASIC4.63□□□□□ -1.67
RFX1P22670 AC025445.1-201ENST00000502728 300 ntBASIC4.63□□□□□ -1.67
RFX1P22670 AIG1P1-201ENST00000503376 148 ntBASIC4.63□□□□□ -1.67
RFX1P22670 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.63□□□□□ -1.67
RFX1P22670 SNORA81.3-201ENST00000517283 198 ntBASIC4.63□□□□□ -1.67
RFX1P22670 CYP4A27P-201ENST00000567218 190 ntBASIC4.63□□□□□ -1.67
RFX1P22670 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.63□□□□□ -1.67
RFX1P22670 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.63□□□□□ -1.67
RFX1P22670 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.63□□□□□ -1.67
RFX1P22670 AC006111.3-201ENST00000622137 383 ntBASIC4.63□□□□□ -1.67
RFX1P22670 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RFX1P22670 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RFX1P22670 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RFX1P22670 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFX1P22670 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RFX1P22670 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.63□□□□□ -1.67
RFX1P22670 BX322639.1-202ENST00000423987 2213 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms