Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.27□□□□□ -2.37
HIST1H1DP16402 AL121579.1-201ENST00000555129 305 ntBASIC0.27□□□□□ -2.37
HIST1H1DP16402 AC091489.2-201ENST00000566263 604 ntBASIC0.27□□□□□ -2.37
HIST1H1DP16402 AC068790.6-201ENST00000602558 258 ntBASIC0.27□□□□□ -2.37
HIST1H1DP16402 AC069114.2-201ENST00000604699 304 ntBASIC0.27□□□□□ -2.37
HIST1H1DP16402 AL357080.1-201ENST00000617394 239 ntBASIC0.27□□□□□ -2.37
HIST1H1DP16402 AC106858.1-201ENST00000637497 429 ntBASIC0.27□□□□□ -2.37
HIST1H1DP16402 AC010615.1-201ENST00000594254 1764 ntBASIC0.27□□□□□ -2.37
HIST1H1DP16402 Y_RNA.332-201ENST00000365271 113 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
HIST1H1DP16402 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
HIST1H1DP16402 MTCO1P56-201ENST00000401674 224 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 AL357139.1-201ENST00000407792 426 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 BX119904.4-201ENST00000424402 301 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 AC104651.1-201ENST00000427559 735 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.26□□□□□ -2.37
HIST1H1DP16402 AC002429.1-201ENST00000437672 148 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.26□□□□□ -2.37
HIST1H1DP16402 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 AC104629.1-201ENST00000494226 508 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.26□□□□□ -2.37
HIST1H1DP16402 RNU6-1053P-201ENST00000515930 101 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 SNORA31.3-201ENST00000516029 96 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 RNU6-390P-201ENST00000516259 103 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 RNU6-1261P-201ENST00000517194 104 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.26□□□□□ -2.37
HIST1H1DP16402 AC009902.1-201ENST00000519351 183 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.26□□□□□ -2.37
HIST1H1DP16402 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.26□□□□□ -2.37
HIST1H1DP16402 RMST_4.1-201ENST00000616886 107 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 ELL2P3-201ENST00000457883 1602 ntBASIC0.26□□□□□ -2.37
HIST1H1DP16402 Y_RNA.124-201ENST00000363339 93 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 RNU6-97P-201ENST00000363387 104 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 U3.8-201ENST00000363675 217 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 Y_RNA.338-201ENST00000365320 114 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
HIST1H1DP16402 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.25□□□□□ -2.37
HIST1H1DP16402 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.25□□□□□ -2.37
HIST1H1DP16402 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.25□□□□□ -2.37
HIST1H1DP16402 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.25□□□□□ -2.37
HIST1H1DP16402 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.25□□□□□ -2.37
HIST1H1DP16402 RNU7-140P-201ENST00000459546 60 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.25□□□□□ -2.37
HIST1H1DP16402 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.25□□□□□ -2.37
HIST1H1DP16402 RNA5SP255-201ENST00000516370 107 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.25□□□□□ -2.37
HIST1H1DP16402 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.25□□□□□ -2.37
HIST1H1DP16402 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.25□□□□□ -2.37
HIST1H1DP16402 AC006518.2-201ENST00000542513 940 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.25□□□□□ -2.37
HIST1H1DP16402 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.25□□□□□ -2.37
HIST1H1DP16402 BNIP3P30-201ENST00000601184 574 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 AL590229.1-201ENST00000603497 542 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 DPPA3P3-201ENST00000603842 430 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 AL353765.1-201ENST00000605514 183 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 AC253576.2-201ENST00000618815 580 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 AL445264.1-201ENST00000621719 171 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 MIR6516-201ENST00000630554 81 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 MIR5087-201ENST00000635826 76 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 AC099654.9-201ENST00000637055 678 ntBASIC0.25□□□□□ -2.37
HIST1H1DP16402 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.24□□□□□ -2.37
HIST1H1DP16402 Y_RNA.25-201ENST00000362528 102 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 RNU6-945P-201ENST00000383947 107 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 RNU6-114P-201ENST00000384704 105 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 RAB28P5-201ENST00000427490 651 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 ISCA1P6-201ENST00000427740 390 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 AL603825.1-201ENST00000438481 80 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 AL008629.1-201ENST00000438615 184 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.24□□□□□ -2.37
HIST1H1DP16402 RPS29P1-201ENST00000465274 159 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.24□□□□□ -2.37
HIST1H1DP16402 AC079140.3-201ENST00000511111 550 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 FABP5P5-201ENST00000515537 406 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 RNU6-572P-201ENST00000516724 80 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.24□□□□□ -2.37
HIST1H1DP16402 AC105148.1-201ENST00000604961 409 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 AP000654.2-201ENST00000605633 586 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.24□□□□□ -2.37
HIST1H1DP16402 AL158163.2-201ENST00000619110 700 ntBASIC0.24□□□□□ -2.37
HIST1H1DP16402 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.23□□□□□ -2.37
HIST1H1DP16402 OR4G2P-201ENST00000328113 903 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 Y_RNA.40-201ENST00000362645 93 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 RNU6-216P-201ENST00000363282 104 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 RNU6-622P-201ENST00000384272 103 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 RNU6-549P-201ENST00000384433 107 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 RNU6-910P-201ENST00000390844 107 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 RNU6-1176P-201ENST00000390955 107 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 RNU2-23P-201ENST00000410545 195 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.23□□□□□ -2.37
HIST1H1DP16402 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.23□□□□□ -2.37
HIST1H1DP16402 AC007000.2-201ENST00000442564 487 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 AL353752.1-201ENST00000454946 260 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.23□□□□□ -2.37
HIST1H1DP16402 snoU13.27-201ENST00000459278 104 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 AC010631.1-201ENST00000474150 156 ntBASIC0.23□□□□□ -2.37
HIST1H1DP16402 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.23□□□□□ -2.37
HIST1H1DP16402 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms