Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 BPY2DP-201ENST00000422208 265 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 RPL23AP95-201ENST00000426806 265 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.68□□□□□ -1.82
COL6A2P12110 AC007969.2-201ENST00000441891 191 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 HMGN2P10-201ENST00000448085 265 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.68□□□□□ -1.82
COL6A2P12110 U3.44-201ENST00000458938 192 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.68□□□□□ -1.82
COL6A2P12110 AC025465.3-201ENST00000510570 311 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 RNU6-928P-201ENST00000516876 104 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.68□□□□□ -1.82
COL6A2P12110 AC020895.1-201ENST00000595362 272 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 AC078899.3-201ENST00000599065 212 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 MIR6500-201ENST00000622700 86 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 AC091903.1-201ENST00000624322 454 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 RNA5SP196-201ENST00000625967 102 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.68□□□□□ -1.82
COL6A2P12110 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL6A2P12110 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
COL6A2P12110 AC002546.1-201ENST00000588041 2504 ntBASIC3.68□□□□□ -1.82
COL6A2P12110 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL6A2P12110 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL6A2P12110 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.67□□□□□ -1.82
COL6A2P12110 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL6A2P12110 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL6A2P12110 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
COL6A2P12110 SPRR2C-201ENST00000290702 219 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 MIR372-201ENST00000362225 67 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 Y_RNA.26-201ENST00000362539 101 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 SNORD115-32-201ENST00000364079 82 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 RNU6-806P-201ENST00000365147 105 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 Y_RNA.447-201ENST00000384184 113 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 RNU6-708P-201ENST00000384217 107 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 RNU6-17P-201ENST00000384245 107 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 RNY3P4-201ENST00000384428 101 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 RNU6-18P-201ENST00000384527 107 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 SNORD116-20-201ENST00000384529 92 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 RNU6-130P-201ENST00000411112 103 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 AC099548.1-201ENST00000421443 426 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 NDUFB1P1-201ENST00000435191 180 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 RPL23AP22-201ENST00000437556 453 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.67□□□□□ -1.82
COL6A2P12110 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.67□□□□□ -1.82
COL6A2P12110 LINC01399-202ENST00000458450 244 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 RNA5SP310-201ENST00000459084 116 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 RNU6-1132P-201ENST00000459214 107 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 AC067942.3-201ENST00000512025 362 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.67□□□□□ -1.82
COL6A2P12110 AC022695.1-201ENST00000522089 237 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.67□□□□□ -1.82
COL6A2P12110 MRPS36P4-201ENST00000534436 298 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 AC007458.1-201ENST00000542812 373 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 AC021739.1-201ENST00000559631 174 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 AC106785.1-201ENST00000565935 262 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 AC120057.2-201ENST00000571520 271 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 AC090617.3-201ENST00000573670 475 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 MIR3609-201ENST00000582661 80 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 AC010928.2-201ENST00000588017 287 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 RMST_6.1-201ENST00000611980 203 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 RNVU1-4-201ENST00000612985 164 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 AC097372.5-201ENST00000623665 376 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL6A2P12110 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.67□□□□□ -1.82
COL6A2P12110 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL6A2P12110 AL136164.4-201ENST00000625013 2135 ntBASIC3.67□□□□□ -1.82
COL6A2P12110 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL6A2P12110 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL6A2P12110 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.66□□□□□ -1.82
COL6A2P12110 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.66□□□□□ -1.82
COL6A2P12110 AC010615.1-201ENST00000594254 1764 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL6A2P12110 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL6A2P12110 Y_RNA.350-201ENST00000365409 98 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 AL359837.1-201ENST00000381357 287 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 RNU6-968P-201ENST00000384076 107 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.66□□□□□ -1.82
COL6A2P12110 FTH1P15-201ENST00000406984 280 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 AL591034.1-201ENST00000407447 340 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 RPL21P40-201ENST00000428586 483 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 RPL26P9-201ENST00000457466 433 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 RPS26P21-201ENST00000475397 348 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 MRPL42P6-201ENST00000486397 371 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 RPL30P1-201ENST00000488676 339 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 AC006445.2-201ENST00000510061 472 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 RNU6-397P-201ENST00000516226 104 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 Y_RNA.713-201ENST00000517013 96 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 AL391261.3-201ENST00000557194 520 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.66□□□□□ -1.82
COL6A2P12110 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.66□□□□□ -1.82
COL6A2P12110 AC110491.1-201ENST00000562191 2010 ntBASIC3.66□□□□□ -1.82
COL6A2P12110 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.66□□□□□ -1.82
COL6A2P12110 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
COL6A2P12110 RNA5SP42-201ENST00000364278 115 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 RNU6-1280P-201ENST00000365211 107 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 RNA5SP283-201ENST00000365604 119 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 Y_RNA.483-201ENST00000384380 101 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 Y_RNA.562-201ENST00000384695 113 ntBASIC3.65□□□□□ -1.83
COL6A2P12110 RPS4XP3-201ENST00000398541 413 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms