Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNU6-6P-201ENST00000606623 107 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AC072046.2-201ENST00000618366 268 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AC008121.3-201ENST00000618726 433 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 Z69720.2-201ENST00000624755 279 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AP003400.5-201ENST00000624827 617 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AC090517.3-201ENST00000625170 141 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 MIR3974-201ENST00000637126 96 ntBASIC1.5□□□□□ -2.17
HLA-DQA1P01909 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
HLA-DQA1P01909 RNU4-82P-201ENST00000362443 140 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 RNU6-212P-201ENST00000362642 104 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 RNU6-655P-201ENST00000362858 107 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 RNU6-527P-201ENST00000363425 104 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 Y_RNA.159-201ENST00000363674 87 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
HLA-DQA1P01909 RNU6-1274P-201ENST00000384557 107 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 SNORD70.1-201ENST00000391007 85 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 RNU2-48P-201ENST00000410694 191 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 OR9R1P-201ENST00000412200 877 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AL139413.1-201ENST00000421309 217 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC007969.2-201ENST00000441891 191 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 MTCO1P19-201ENST00000443487 500 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC006026.2-201ENST00000457376 180 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC055731.1-201ENST00000474387 401 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.49□□□□□ -2.17
HLA-DQA1P01909 MTCO2P4-201ENST00000517968 247 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AP002963.1-201ENST00000530590 184 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AL391840.1-201ENST00000571144 367 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC008752.3-201ENST00000588113 712 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC078795.2-201ENST00000602835 1252 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AC008147.4-201ENST00000617570 1204 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 AL159153.1-201ENST00000619688 317 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 U4.7-201ENST00000638126 106 ntBASIC1.49□□□□□ -2.17
HLA-DQA1P01909 ELL2P3-201ENST00000457883 1602 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HLA-DQA1P01909 MIR449A-201ENST00000362113 91 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 snoU2_19.1-201ENST00000362361 80 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 Y_RNA.111-201ENST00000363248 100 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 RNU6-1210P-201ENST00000363775 107 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 RNU6-944P-201ENST00000364023 107 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 Y_RNA.500-201ENST00000384466 111 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 RNU6-393P-201ENST00000384475 107 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 MIR544A-201ENST00000384855 91 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 SNORA16.2-201ENST00000390991 127 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AC068050.1-201ENST00000394891 380 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 CBX3P9-201ENST00000402326 552 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 SNORA11.4-201ENST00000408823 129 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AC090960.1-201ENST00000421072 306 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.48□□□□□ -2.17
HLA-DQA1P01909 RPL39P29-201ENST00000447779 157 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AL122001.1-201ENST00000457027 370 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 RNU6-956P-201ENST00000458868 103 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AP003392.2-201ENST00000527269 208 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AP005435.4-201ENST00000529514 284 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AP002770.2-201ENST00000543613 532 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DQA1P01909 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DQA1P01909 AC123912.5-201ENST00000605470 343 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 Z82243.1-201ENST00000609432 473 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HLA-DQA1P01909 ZNF680P1-201ENST00000436625 1469 ntBASIC1.48□□□□□ -2.17
HLA-DQA1P01909 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 U3.13-201ENST00000364804 214 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 RNU6-234P-201ENST00000365229 104 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 RNU6-1127P-201ENST00000384580 107 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 RNU6-606P-201ENST00000384721 111 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 RNU4-46P-201ENST00000410818 138 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 MTATP6P17-201ENST00000431030 672 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AL591043.1-201ENST00000432461 424 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC022364.2-201ENST00000457963 554 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 SCARNA18-201ENST00000459004 134 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 snoU13.14-201ENST00000459372 104 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC010486.3-201ENST00000511602 785 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 AC117532.1-201ENST00000514638 323 ntBASIC1.47□□□□□ -2.17
HLA-DQA1P01909 RNU2-69P-201ENST00000516061 100 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms