Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AP001025.1-201ENST00000486139 332 ntBASIC1.07□□□□□ -2.24
HLA-DRAP01903 AC010409.1-201ENST00000487382 476 ntBASIC1.07□□□□□ -2.24
HLA-DRAP01903 HMGN1P13-201ENST00000505795 138 ntBASIC1.07□□□□□ -2.24
HLA-DRAP01903 ARL2BPP4-201ENST00000506854 471 ntBASIC1.07□□□□□ -2.24
HLA-DRAP01903 AC021146.8-201ENST00000507455 733 ntBASIC1.07□□□□□ -2.24
HLA-DRAP01903 AC068587.4-201ENST00000533893 186 ntBASIC1.07□□□□□ -2.24
HLA-DRAP01903 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.07□□□□□ -2.24
HLA-DRAP01903 AC072039.2-201ENST00000608883 439 ntBASIC1.07□□□□□ -2.24
HLA-DRAP01903 AL355472.4-201ENST00000610233 626 ntBASIC1.07□□□□□ -2.24
HLA-DRAP01903 AC130324.3-201ENST00000614165 542 ntBASIC1.07□□□□□ -2.24
HLA-DRAP01903 SCARNA4-202ENST00000625402 129 ntBASIC1.07□□□□□ -2.24
HLA-DRAP01903 RNY1P10-201ENST00000363268 113 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 SNORD116-20-201ENST00000384529 92 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 RNU6-298P-201ENST00000390888 96 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 Y_RNA.597-201ENST00000410463 100 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 RPL21P90-201ENST00000415692 466 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.06□□□□□ -2.24
HLA-DRAP01903 USP9YP17-201ENST00000444617 696 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 RPL39P29-201ENST00000447779 157 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 NDUFB1P2-201ENST00000449477 176 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HLA-DRAP01903 DUXAP8-207ENST00000456786 622 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 TOMM22P6-201ENST00000465035 409 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DRAP01903 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.06□□□□□ -2.24
HLA-DRAP01903 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DRAP01903 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DRAP01903 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.06□□□□□ -2.24
HLA-DRAP01903 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
HLA-DRAP01903 MIR3169-201ENST00000578032 83 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 AC022022.2-201ENST00000602989 360 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 AL353778.1-201ENST00000603149 408 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 MIR15A-201ENST00000607334 83 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 AL133216.2-202ENST00000634512 349 ntBASIC1.06□□□□□ -2.24
HLA-DRAP01903 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.06□□□□□ -2.24
HLA-DRAP01903 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
HLA-DRAP01903 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HLA-DRAP01903 OR4G2P-201ENST00000328113 903 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 snoU2_19.1-201ENST00000362361 80 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 AL357139.1-201ENST00000407792 426 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 RPS15AP10-201ENST00000432472 382 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 LARP1BP3-201ENST00000437229 869 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 AL135790.2-201ENST00000437701 267 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DRAP01903 AL353752.1-201ENST00000454946 260 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 RNU6-333P-201ENST00000459117 107 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 RPL30P1-201ENST00000488676 339 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 RNU6-1092P-201ENST00000516955 87 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 AP000654.2-201ENST00000605633 586 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 AL121895.2-201ENST00000619558 447 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 MIR1248-201ENST00000629190 106 ntBASIC1.05□□□□□ -2.24
HLA-DRAP01903 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DRAP01903 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
HLA-DRAP01903 SNORD3E-201ENST00000362899 217 ntBASIC1.04□□□□□ -2.24
HLA-DRAP01903 SNORD114-27-201ENST00000363766 70 ntBASIC1.04□□□□□ -2.24
HLA-DRAP01903 SNORA75B-201ENST00000384053 137 ntBASIC1.04□□□□□ -2.24
HLA-DRAP01903 SNORD116-12-201ENST00000384468 92 ntBASIC1.04□□□□□ -2.24
HLA-DRAP01903 DYNLT3P2-201ENST00000442517 295 ntBASIC1.04□□□□□ -2.24
HLA-DRAP01903 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HLA-DRAP01903 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DRAP01903 snoU109.2-201ENST00000459316 135 ntBASIC1.04□□□□□ -2.24
HLA-DRAP01903 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DRAP01903 RNU7-40P-201ENST00000516397 64 ntBASIC1.04□□□□□ -2.24
HLA-DRAP01903 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DRAP01903 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.04□□□□□ -2.24
HLA-DRAP01903 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DRAP01903 AL138889.2-201ENST00000603883 242 ntBASIC1.04□□□□□ -2.24
HLA-DRAP01903 AL022154.1-201ENST00000604698 785 ntBASIC1.04□□□□□ -2.24
HLA-DRAP01903 AC024940.5-201ENST00000622889 474 ntBASIC1.04□□□□□ -2.24
HLA-DRAP01903 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.04□□□□□ -2.24
HLA-DRAP01903 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
HLA-DRAP01903 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
HLA-DRAP01903 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HLA-DRAP01903 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HLA-DRAP01903 RNY4P24-201ENST00000362735 96 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 SNORD33-201ENST00000362761 85 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 Y_RNA.472-201ENST00000384322 102 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 RNU6-769P-201ENST00000384407 104 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DRAP01903 TXNL1P1-201ENST00000429528 554 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 AL117351.1-201ENST00000438864 766 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.03□□□□□ -2.24
HLA-DRAP01903 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.03□□□□□ -2.24
HLA-DRAP01903 MTND2P33-201ENST00000506452 1031 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 AC119751.4-201ENST00000507498 357 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.03□□□□□ -2.24
HLA-DRAP01903 AC116353.3-201ENST00000511215 249 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DRAP01903 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DRAP01903 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DRAP01903 MIR544B-201ENST00000582372 78 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 AC078795.2-201ENST00000602835 1252 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 PART1_2.1-201ENST00000612397 250 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 U6.42-201ENST00000618440 107 ntBASIC1.03□□□□□ -2.24
HLA-DRAP01903 MIR337-201ENST00000362281 93 ntBASIC1.02□□□□□ -2.25
HLA-DRAP01903 RNU6-112P-201ENST00000363599 104 ntBASIC1.02□□□□□ -2.25
HLA-DRAP01903 RNY3P13-201ENST00000365542 102 ntBASIC1.02□□□□□ -2.25
HLA-DRAP01903 RNU6-946P-201ENST00000383878 107 ntBASIC1.02□□□□□ -2.25
HLA-DRAP01903 RNU6-1080P-201ENST00000383982 107 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 684.7 ms