Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 HMGN2P3-201ENST00000433603 273 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 AC112220.1-201ENST00000434628 355 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 HMGN2P5-201ENST00000436882 273 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RAPGEF3O95398 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.08□□□□□ -1.76
RAPGEF3O95398 AL163153.1-201ENST00000554223 283 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 MIR4782-201ENST00000577987 79 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.08□□□□□ -1.76
RAPGEF3O95398 AC078899.3-201ENST00000599065 212 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 CYP2C61P-201ENST00000604072 290 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 AC008962.1-201ENST00000605729 304 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 AC064836.2-201ENST00000609491 462 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.08□□□□□ -1.76
RAPGEF3O95398 AC133104.2-201ENST00000615272 193 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 AC068831.7-201ENST00000616954 363 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 MIR6076-201ENST00000617521 113 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 AC006111.3-201ENST00000622137 383 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.08□□□□□ -1.76
RAPGEF3O95398 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RAPGEF3O95398 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.07□□□□□ -1.76
RAPGEF3O95398 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RAPGEF3O95398 RNU6-1188P-201ENST00000363795 107 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 RNU6-43P-201ENST00000384302 107 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 RPS4XP3-201ENST00000398541 413 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 RNA5SP31-201ENST00000411144 127 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 HMGN2P30-201ENST00000423237 256 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 HMGB3P8-201ENST00000449709 577 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 RPL12P25-201ENST00000455592 494 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 Y_RNA.653-201ENST00000459091 95 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.07□□□□□ -1.76
RAPGEF3O95398 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.07□□□□□ -1.76
RAPGEF3O95398 RNA5SP217-201ENST00000515959 91 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 RNU6-1153P-201ENST00000516760 105 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.07□□□□□ -1.76
RAPGEF3O95398 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.07□□□□□ -1.76
RAPGEF3O95398 AC093249.1-201ENST00000567049 203 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.07□□□□□ -1.76
RAPGEF3O95398 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 AC090971.5-201ENST00000621102 293 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.07□□□□□ -1.76
RAPGEF3O95398 U6.99-201ENST00000637524 83 ntBASIC4.07□□□□□ -1.76
RAPGEF3O95398 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RAPGEF3O95398 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RAPGEF3O95398 RNU6-778P-201ENST00000363269 103 ntBASIC4.06□□□□□ -1.76
RAPGEF3O95398 SNORA63-201ENST00000363450 132 ntBASIC4.06□□□□□ -1.76
RAPGEF3O95398 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.06□□□□□ -1.76
RAPGEF3O95398 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RAPGEF3O95398 HIGD1AP11-201ENST00000438361 280 ntBASIC4.06□□□□□ -1.76
RAPGEF3O95398 RN7SL633P-201ENST00000488974 297 ntBASIC4.06□□□□□ -1.76
RAPGEF3O95398 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.06□□□□□ -1.76
RAPGEF3O95398 RNA5SP320-201ENST00000516263 124 ntBASIC4.06□□□□□ -1.76
RAPGEF3O95398 AC109479.2-201ENST00000517842 174 ntBASIC4.06□□□□□ -1.76
RAPGEF3O95398 AL121821.2-201ENST00000556081 394 ntBASIC4.06□□□□□ -1.76
RAPGEF3O95398 MIR3609-201ENST00000582661 80 ntBASIC4.06□□□□□ -1.76
RAPGEF3O95398 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RAPGEF3O95398 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAPGEF3O95398 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAPGEF3O95398 Y_RNA.187-201ENST00000363918 113 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
RAPGEF3O95398 RNU1-73P-201ENST00000383971 164 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 Y_RNA.579-201ENST00000390939 94 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 NDUFS5P4-201ENST00000412983 318 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.05□□□□□ -1.76
RAPGEF3O95398 PGBD4P6-201ENST00000421501 610 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 BX679664.1-201ENST00000434429 253 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
RAPGEF3O95398 AL590664.1-201ENST00000448065 339 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 Y_RNA.639-201ENST00000458981 102 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 RPL30P14-201ENST00000482744 348 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC4.05□□□□□ -1.76
RAPGEF3O95398 Y_RNA.708-201ENST00000516950 96 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 AC104027.1-201ENST00000521887 300 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.05□□□□□ -1.76
RAPGEF3O95398 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.05□□□□□ -1.76
RAPGEF3O95398 AC123912.5-201ENST00000605470 343 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 AL161423.1-201ENST00000613700 262 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 SCARNA4-202ENST00000625402 129 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RAPGEF3O95398 MAPK10-362ENST00000641864 4484 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 ZNF72P-201ENST00000425869 1908 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 AP006437.1-201ENST00000641440 3685 ntBASIC4.05□□□□□ -1.76
RAPGEF3O95398 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
RAPGEF3O95398 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.04□□□□□ -1.76
RAPGEF3O95398 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
RAPGEF3O95398 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RAPGEF3O95398 MIR518C-201ENST00000384822 101 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 SNORD73A-201ENST00000386062 65 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 SNORD56-201ENST00000413522 71 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 AL353729.1-201ENST00000425044 720 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.04□□□□□ -1.76
RAPGEF3O95398 MTCYBP6-201ENST00000441810 138 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.04□□□□□ -1.76
RAPGEF3O95398 ELOCP24-201ENST00000456370 334 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 AC010401.1-201ENST00000463867 348 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 AC005741.1-201ENST00000511094 432 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 RNU6-1183P-201ENST00000517054 60 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 AC104576.1-201ENST00000524225 88 ntBASIC4.04□□□□□ -1.76
RAPGEF3O95398 AC008121.1-201ENST00000603244 268 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms