Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC098862.1-201ENST00000504991 413 ntBASIC1.31□□□□□ -2.2
VAPBO95292 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.31□□□□□ -2.2
VAPBO95292 COPS8P3-201ENST00000526024 482 ntBASIC1.31□□□□□ -2.2
VAPBO95292 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.31□□□□□ -2.2
VAPBO95292 AC015712.3-201ENST00000559380 164 ntBASIC1.31□□□□□ -2.2
VAPBO95292 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.31□□□□□ -2.2
VAPBO95292 AC008269.2-201ENST00000561915 1105 ntBASIC1.31□□□□□ -2.2
VAPBO95292 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.31□□□□□ -2.2
VAPBO95292 AC091135.1-201ENST00000585943 307 ntBASIC1.31□□□□□ -2.2
VAPBO95292 AL136363.2-201ENST00000604173 851 ntBASIC1.31□□□□□ -2.2
VAPBO95292 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.31□□□□□ -2.2
VAPBO95292 AC025754.2-201ENST00000606491 432 ntBASIC1.31□□□□□ -2.2
VAPBO95292 AP002360.4-201ENST00000606980 481 ntBASIC1.31□□□□□ -2.2
VAPBO95292 AC091304.6-201ENST00000619761 202 ntBASIC1.31□□□□□ -2.2
VAPBO95292 MIR7843-201ENST00000622274 79 ntBASIC1.31□□□□□ -2.2
VAPBO95292 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.31□□□□□ -2.2
VAPBO95292 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
VAPBO95292 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
VAPBO95292 Y_RNA.18-201ENST00000362461 102 ntBASIC1.3□□□□□ -2.2
VAPBO95292 RNU6-414P-201ENST00000363705 104 ntBASIC1.3□□□□□ -2.2
VAPBO95292 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.3□□□□□ -2.2
VAPBO95292 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.3□□□□□ -2.2
VAPBO95292 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.3□□□□□ -2.2
VAPBO95292 AC137499.1-201ENST00000427602 88 ntBASIC1.3□□□□□ -2.2
VAPBO95292 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.3□□□□□ -2.2
VAPBO95292 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.3□□□□□ -2.2
VAPBO95292 RPL39P29-201ENST00000447779 157 ntBASIC1.3□□□□□ -2.2
VAPBO95292 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.3□□□□□ -2.2
VAPBO95292 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.3□□□□□ -2.2
VAPBO95292 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.3□□□□□ -2.2
VAPBO95292 snoU13.23-201ENST00000458863 104 ntBASIC1.3□□□□□ -2.2
VAPBO95292 HMGN1P13-201ENST00000505795 138 ntBASIC1.3□□□□□ -2.2
VAPBO95292 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.3□□□□□ -2.2
VAPBO95292 SNORA31.17-201ENST00000516953 127 ntBASIC1.3□□□□□ -2.2
VAPBO95292 BNIP3P6-201ENST00000549284 499 ntBASIC1.3□□□□□ -2.2
VAPBO95292 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.3□□□□□ -2.2
VAPBO95292 AP001004.1-201ENST00000582468 324 ntBASIC1.3□□□□□ -2.2
VAPBO95292 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.3□□□□□ -2.2
VAPBO95292 AL158050.2-201ENST00000605336 568 ntBASIC1.3□□□□□ -2.2
VAPBO95292 PRR13P7-201ENST00000605538 430 ntBASIC1.3□□□□□ -2.2
VAPBO95292 AL139286.2-201ENST00000606838 396 ntBASIC1.3□□□□□ -2.2
VAPBO95292 AL157392.4-201ENST00000609756 345 ntBASIC1.3□□□□□ -2.2
VAPBO95292 AC012409.4-201ENST00000612923 249 ntBASIC1.3□□□□□ -2.2
VAPBO95292 AL590240.4-201ENST00000616908 390 ntBASIC1.3□□□□□ -2.2
VAPBO95292 AL159153.1-201ENST00000619688 317 ntBASIC1.3□□□□□ -2.2
VAPBO95292 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VAPBO95292 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
VAPBO95292 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
VAPBO95292 SNORD56.2-201ENST00000363242 71 ntBASIC1.29□□□□□ -2.2
VAPBO95292 RNU6-809P-201ENST00000384461 107 ntBASIC1.29□□□□□ -2.2
VAPBO95292 RNU4-62P-201ENST00000410125 130 ntBASIC1.29□□□□□ -2.2
VAPBO95292 MTCO2P21-201ENST00000419780 677 ntBASIC1.29□□□□□ -2.2
VAPBO95292 SDAD1P3-201ENST00000427380 333 ntBASIC1.29□□□□□ -2.2
VAPBO95292 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.29□□□□□ -2.2
VAPBO95292 CR769776.1-201ENST00000441254 787 ntBASIC1.29□□□□□ -2.2
VAPBO95292 AC118469.1-201ENST00000442943 488 ntBASIC1.29□□□□□ -2.2
VAPBO95292 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.29□□□□□ -2.2
VAPBO95292 HSPE1P24-201ENST00000450782 238 ntBASIC1.29□□□□□ -2.2
VAPBO95292 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
VAPBO95292 AC004223.1-201ENST00000479840 271 ntBASIC1.29□□□□□ -2.2
VAPBO95292 AC108210.2-201ENST00000503681 201 ntBASIC1.29□□□□□ -2.2
VAPBO95292 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.29□□□□□ -2.2
VAPBO95292 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.29□□□□□ -2.2
VAPBO95292 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.29□□□□□ -2.2
VAPBO95292 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.29□□□□□ -2.2
VAPBO95292 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.29□□□□□ -2.2
VAPBO95292 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.29□□□□□ -2.2
VAPBO95292 MIR4509-3-201ENST00000578671 94 ntBASIC1.29□□□□□ -2.2
VAPBO95292 MIR4509-2-201ENST00000583920 94 ntBASIC1.29□□□□□ -2.2
VAPBO95292 AC005786.1-201ENST00000588553 154 ntBASIC1.29□□□□□ -2.2
VAPBO95292 AL512598.1-201ENST00000610158 273 ntBASIC1.29□□□□□ -2.2
VAPBO95292 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.29□□□□□ -2.2
VAPBO95292 MIR4509-1-201ENST00000618224 94 ntBASIC1.29□□□□□ -2.2
VAPBO95292 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.29□□□□□ -2.2
VAPBO95292 OR4G3P-201ENST00000633500 913 ntBASIC1.29□□□□□ -2.2
VAPBO95292 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.29□□□□□ -2.2
VAPBO95292 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.28□□□□□ -2.2
VAPBO95292 SNORA62.1-201ENST00000364287 154 ntBASIC1.28□□□□□ -2.2
VAPBO95292 RNU1-78P-201ENST00000391248 165 ntBASIC1.28□□□□□ -2.2
VAPBO95292 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.28□□□□□ -2.2
VAPBO95292 MIR1267-201ENST00000408723 78 ntBASIC1.28□□□□□ -2.2
VAPBO95292 AL591043.1-201ENST00000432461 424 ntBASIC1.28□□□□□ -2.2
VAPBO95292 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
VAPBO95292 AL121601.2-201ENST00000438019 707 ntBASIC1.28□□□□□ -2.2
VAPBO95292 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.28□□□□□ -2.2
VAPBO95292 MTND5P2-201ENST00000442927 1142 ntBASIC1.28□□□□□ -2.2
VAPBO95292 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.28□□□□□ -2.2
VAPBO95292 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.28□□□□□ -2.2
VAPBO95292 RNU6-333P-201ENST00000459117 107 ntBASIC1.28□□□□□ -2.2
VAPBO95292 RN7SKP210-201ENST00000459176 261 ntBASIC1.28□□□□□ -2.2
VAPBO95292 AC009646.1-201ENST00000510455 318 ntBASIC1.28□□□□□ -2.2
VAPBO95292 AC108078.2-201ENST00000510750 236 ntBASIC1.28□□□□□ -2.2
VAPBO95292 RNA5SP490-201ENST00000517141 136 ntBASIC1.28□□□□□ -2.2
VAPBO95292 MTND4LP18-201ENST00000526864 291 ntBASIC1.28□□□□□ -2.2
VAPBO95292 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.28□□□□□ -2.2
VAPBO95292 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.28□□□□□ -2.2
VAPBO95292 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.28□□□□□ -2.2
VAPBO95292 MIR3169-201ENST00000578032 83 ntBASIC1.28□□□□□ -2.2
VAPBO95292 AC105148.1-201ENST00000604961 409 ntBASIC1.28□□□□□ -2.2
VAPBO95292 AL049777.1-201ENST00000622740 518 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms