Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 Y_RNA.123-201ENST00000363338 102 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 Y_RNA.261-201ENST00000364631 102 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 Y_RNA.446-201ENST00000384178 104 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 RNU6-318P-201ENST00000384283 103 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 RNU6-21P-201ENST00000384710 107 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 MIR301A-201ENST00000385261 86 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 MIR1290-201ENST00000408735 78 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 RNU6-257P-201ENST00000410238 98 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 RNU5A-5P-201ENST00000411054 116 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 SNORA71B-202ENST00000439232 272 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 UQCRBP2-201ENST00000447827 297 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM13O60858 RPS23P7-201ENST00000466210 444 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM13O60858 RAC1P2-201ENST00000511164 579 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 RNA5SP208-201ENST00000516156 78 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM13O60858 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM13O60858 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM13O60858 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM13O60858 AC023575.1-201ENST00000580510 358 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 AC002545.1-201ENST00000592511 181 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM13O60858 AC005046.1-201ENST00000608515 625 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 AL161629.2-201ENST00000615347 275 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 AC099506.2-201ENST00000623074 221 ntBASIC3.73□□□□□ -1.81
TRIM13O60858 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM13O60858 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
TRIM13O60858 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM13O60858 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.73□□□□□ -1.81
TRIM13O60858 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM13O60858 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.72□□□□□ -1.81
TRIM13O60858 AL021368.2-201ENST00000606125 5352 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM13O60858 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TRIM13O60858 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM13O60858 OR4G2P-202ENST00000641004 1759 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM13O60858 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM13O60858 Y_RNA.136-201ENST00000363444 102 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 RNA5SP130-201ENST00000364431 114 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 Y_RNA.262-201ENST00000364641 102 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 SNORA46.1-201ENST00000391069 153 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 RPS4XP3-201ENST00000398541 413 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 AC002075.2-201ENST00000425207 252 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 TOMM20P4-201ENST00000427861 435 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 Z82188.1-201ENST00000436709 154 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM13O60858 RPS29P33-201ENST00000456717 146 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 AC073901.1-201ENST00000462471 408 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 RNU7-110P-201ENST00000516891 62 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 ATP5F1P5-201ENST00000526403 760 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 AC005476.1-201ENST00000554427 397 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 HMGB1P14-201ENST00000557424 591 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 MED28P6-201ENST00000558776 231 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 KLKP1-201ENST00000595979 403 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 ARF4P1-201ENST00000605447 541 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 AP002826.1-201ENST00000608835 315 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 IGHVIII-44-202ENST00000636235 289 ntBASIC3.72□□□□□ -1.81
TRIM13O60858 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.72□□□□□ -1.81
TRIM13O60858 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
TRIM13O60858 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM13O60858 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM13O60858 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM13O60858 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
TRIM13O60858 MIR412-201ENST00000362142 91 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 SNORD14B-201ENST00000364533 90 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 RNU4-9P-201ENST00000364951 139 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 RNA5SP97-201ENST00000365006 84 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 MIR186-201ENST00000384988 86 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TRIM13O60858 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 AL356867.1-201ENST00000429623 299 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM13O60858 AC016700.2-201ENST00000446011 156 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 TPT1P12-201ENST00000448968 492 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 snoU13.30-201ENST00000458951 104 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 AC010409.1-201ENST00000487382 476 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM13O60858 AC078918.1-201ENST00000498515 228 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 SCARNA15.2-201ENST00000516409 127 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 SNORD116-25-201ENST00000516517 92 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 RNA5SP471-201ENST00000516971 106 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM13O60858 RPL21P9-201ENST00000556149 474 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 MIR5692C2-201ENST00000577959 77 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 AC008121.1-201ENST00000603244 268 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 AC107294.1-201ENST00000609524 467 ntBASIC3.71□□□□□ -1.82
TRIM13O60858 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM13O60858 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM13O60858 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
TRIM13O60858 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM13O60858 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM13O60858 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM13O60858 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TRIM13O60858 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM13O60858 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM13O60858 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM13O60858 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM13O60858 RNU6-512P-201ENST00000364438 103 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms