Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 CASP1P1-201ENST00000526345 212 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 ATP5F1P5-201ENST00000526403 760 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 SYF2P1-201ENST00000550658 413 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.64□□□□□ -1.99
LMX1BO60663 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.64□□□□□ -1.99
LMX1BO60663 AC107294.3-201ENST00000609211 526 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 AC011890.2-201ENST00000613393 294 ntBASIC2.64□□□□□ -1.99
LMX1BO60663 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
LMX1BO60663 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LMX1BO60663 AL359693.1-201ENST00000614959 2407 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.63□□□□□ -1.99
LMX1BO60663 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.63□□□□□ -1.99
LMX1BO60663 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LMX1BO60663 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-37P-201ENST00000362692 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-11P-201ENST00000364234 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-25P-201ENST00000383873 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-1-201ENST00000383898 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-48P-201ENST00000384161 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-36P-201ENST00000384172 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-4P-201ENST00000384205 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-5P-201ENST00000384238 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-3P-201ENST00000384314 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-16P-201ENST00000384385 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-15P-201ENST00000384534 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-2-201ENST00000384627 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-29P-201ENST00000384637 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-1105P-201ENST00000384774 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-9-201ENST00000384776 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-33P-201ENST00000384793 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 MIR493-201ENST00000385254 89 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 MIR325-201ENST00000385260 98 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 AL445529.1-201ENST00000398713 389 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.63□□□□□ -1.99
LMX1BO60663 PGBD4P6-201ENST00000421501 610 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 USMG5P1-201ENST00000425964 177 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 MTND3P2-201ENST00000438452 342 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 Z82210.1-201ENST00000440037 231 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.63□□□□□ -1.99
LMX1BO60663 RN7SL429P-201ENST00000479090 223 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RN7SL489P-201ENST00000486185 223 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RN7SL327P-201ENST00000488659 223 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RN7SL633P-201ENST00000488974 297 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 AC008885.1-201ENST00000514930 301 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNA5SP380-201ENST00000517190 98 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 AC009812.2-201ENST00000517657 457 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-988P-201ENST00000519081 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.63□□□□□ -1.99
LMX1BO60663 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.63□□□□□ -1.99
LMX1BO60663 MIR4680-201ENST00000580906 66 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 AC004805.2-201ENST00000605382 482 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 AL121917.1-203ENST00000605534 577 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RNU6-6P-201ENST00000606623 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.63□□□□□ -1.99
LMX1BO60663 AC133104.2-201ENST00000615272 193 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 PISRT1.1-201ENST00000616930 107 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 RN7SL853P-201ENST00000617250 223 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 AC008121.3-201ENST00000618726 433 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 AC099506.2-201ENST00000623074 221 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 U2.21-201ENST00000637295 81 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 AL049641.1-201ENST00000441055 1948 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 AL035425.3-201ENST00000564206 4996 ntBASIC2.63□□□□□ -1.99
LMX1BO60663 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LMX1BO60663 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LMX1BO60663 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LMX1BO60663 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.63□□□□□ -1.99
LMX1BO60663 AC008264.2-201ENST00000610193 3731 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 MAPK10-266ENST00000641066 6555 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LMX1BO60663 RNU6-596P-201ENST00000365395 98 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 Z98749.2-208ENST00000381646 500 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 SNORA7.4-201ENST00000384249 137 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 RNU6-301P-201ENST00000384277 107 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 SNORA41-201ENST00000384675 132 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 SNORD15B-201ENST00000384714 146 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 MIR568-201ENST00000385036 95 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 Y_RNA.645-201ENST00000391229 102 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 MRPL42P3-201ENST00000401492 326 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 RNA5SP274-201ENST00000410484 108 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 RNU6-325P-201ENST00000411132 105 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 RNU2-71P-201ENST00000411395 189 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.62□□□□□ -1.99
LMX1BO60663 AC008267.5-201ENST00000424928 265 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.62□□□□□ -1.99
LMX1BO60663 RPL37P4-201ENST00000448908 268 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 GSTA11P-201ENST00000452866 669 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 HMGN2P16-201ENST00000456802 261 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 AC092798.1-201ENST00000458542 409 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 AC006483.1-201ENST00000487308 313 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 AC092185.1-201ENST00000491371 97 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 AC022493.2-201ENST00000506122 481 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 MTND4LP22-201ENST00000508209 276 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 RNU6-703P-201ENST00000516946 107 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 RN7SKP272-201ENST00000516988 232 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 SNORA31.19-201ENST00000517079 126 ntBASIC2.62□□□□□ -1.99
LMX1BO60663 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LMX1BO60663 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LMX1BO60663 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.62□□□□□ -1.99
LMX1BO60663 AL033523.1-201ENST00000605153 153 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms