Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC119618.1-201ENST00000434191 222 ntBASIC1.33□□□□□ -2.2
GMDSO60547 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.33□□□□□ -2.2
GMDSO60547 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.33□□□□□ -2.2
GMDSO60547 AC023790.1-201ENST00000482174 347 ntBASIC1.33□□□□□ -2.2
GMDSO60547 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.33□□□□□ -2.2
GMDSO60547 AC098862.1-201ENST00000504991 413 ntBASIC1.33□□□□□ -2.2
GMDSO60547 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.33□□□□□ -2.2
GMDSO60547 AC108078.2-201ENST00000510750 236 ntBASIC1.33□□□□□ -2.2
GMDSO60547 AC112206.4-201ENST00000515142 405 ntBASIC1.33□□□□□ -2.2
GMDSO60547 RNVU1-2-201ENST00000516326 135 ntBASIC1.33□□□□□ -2.2
GMDSO60547 MIR5697-201ENST00000578045 78 ntBASIC1.33□□□□□ -2.2
GMDSO60547 DEFB131E-202ENST00000602581 683 ntBASIC1.33□□□□□ -2.2
GMDSO60547 AC063943.3-201ENST00000615562 356 ntBASIC1.33□□□□□ -2.2
GMDSO60547 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
GMDSO60547 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
GMDSO60547 RNU6-809P-201ENST00000384461 107 ntBASIC1.32□□□□□ -2.2
GMDSO60547 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
GMDSO60547 MTND1P20-201ENST00000430341 950 ntBASIC1.32□□□□□ -2.2
GMDSO60547 AL591806.2-201ENST00000433122 173 ntBASIC1.32□□□□□ -2.2
GMDSO60547 MTCO1P44-201ENST00000441935 243 ntBASIC1.32□□□□□ -2.2
GMDSO60547 AMD1P1-201ENST00000457220 922 ntBASIC1.32□□□□□ -2.2
GMDSO60547 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.32□□□□□ -2.2
GMDSO60547 RPS29P23-201ENST00000458635 123 ntBASIC1.32□□□□□ -2.2
GMDSO60547 RNU6-123P-201ENST00000516163 102 ntBASIC1.32□□□□□ -2.2
GMDSO60547 RNA5SP337-201ENST00000517007 109 ntBASIC1.32□□□□□ -2.2
GMDSO60547 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.32□□□□□ -2.2
GMDSO60547 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.32□□□□□ -2.2
GMDSO60547 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.32□□□□□ -2.2
GMDSO60547 AC092106.3-201ENST00000611308 722 ntBASIC1.32□□□□□ -2.2
GMDSO60547 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.32□□□□□ -2.2
GMDSO60547 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.32□□□□□ -2.2
GMDSO60547 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.32□□□□□ -2.2
GMDSO60547 AL445984.1-201ENST00000637834 659 ntBASIC1.32□□□□□ -2.2
GMDSO60547 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
GMDSO60547 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
GMDSO60547 Y_RNA.97-201ENST00000363094 102 ntBASIC1.31□□□□□ -2.2
GMDSO60547 RNU6-414P-201ENST00000363705 104 ntBASIC1.31□□□□□ -2.2
GMDSO60547 RNU6-1222P-201ENST00000384615 107 ntBASIC1.31□□□□□ -2.2
GMDSO60547 MIR122-201ENST00000385044 85 ntBASIC1.31□□□□□ -2.2
GMDSO60547 MRPL42P2-201ENST00000403169 426 ntBASIC1.31□□□□□ -2.2
GMDSO60547 MIR1304-201ENST00000408243 91 ntBASIC1.31□□□□□ -2.2
GMDSO60547 AC007098.1-201ENST00000420122 367 ntBASIC1.31□□□□□ -2.2
GMDSO60547 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.31□□□□□ -2.2
GMDSO60547 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.31□□□□□ -2.2
GMDSO60547 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.31□□□□□ -2.2
GMDSO60547 AL590365.1-201ENST00000450788 243 ntBASIC1.31□□□□□ -2.2
GMDSO60547 RNU1-131P-201ENST00000458943 161 ntBASIC1.31□□□□□ -2.2
GMDSO60547 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.31□□□□□ -2.2
GMDSO60547 HMGN1P13-201ENST00000505795 138 ntBASIC1.31□□□□□ -2.2
GMDSO60547 AC117522.1-201ENST00000509821 380 ntBASIC1.31□□□□□ -2.2
GMDSO60547 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
GMDSO60547 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.31□□□□□ -2.2
GMDSO60547 COPS8P3-201ENST00000526024 482 ntBASIC1.31□□□□□ -2.2
GMDSO60547 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.31□□□□□ -2.2
GMDSO60547 AC090888.2-201ENST00000559765 1144 ntBASIC1.31□□□□□ -2.2
GMDSO60547 MIR3169-201ENST00000578032 83 ntBASIC1.31□□□□□ -2.2
GMDSO60547 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.31□□□□□ -2.2
GMDSO60547 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.31□□□□□ -2.2
GMDSO60547 AL607023.1-201ENST00000620045 248 ntBASIC1.31□□□□□ -2.2
GMDSO60547 AL031667.3-201ENST00000620124 655 ntBASIC1.31□□□□□ -2.2
GMDSO60547 RMST_7.1-201ENST00000621935 268 ntBASIC1.31□□□□□ -2.2
GMDSO60547 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
GMDSO60547 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
GMDSO60547 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
GMDSO60547 RNU6-384P-201ENST00000364900 104 ntBASIC1.3□□□□□ -2.2
GMDSO60547 RNU5E-7P-201ENST00000365290 117 ntBASIC1.3□□□□□ -2.2
GMDSO60547 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
GMDSO60547 RNU6-83P-201ENST00000384568 112 ntBASIC1.3□□□□□ -2.2
GMDSO60547 MIR578-201ENST00000384828 96 ntBASIC1.3□□□□□ -2.2
GMDSO60547 RNU6-1245P-201ENST00000411130 106 ntBASIC1.3□□□□□ -2.2
GMDSO60547 AL513185.2-201ENST00000425543 193 ntBASIC1.3□□□□□ -2.2
GMDSO60547 GDI2P2-201ENST00000445131 608 ntBASIC1.3□□□□□ -2.2
GMDSO60547 AC245517.4-201ENST00000448601 281 ntBASIC1.3□□□□□ -2.2
GMDSO60547 snoU13.23-201ENST00000458863 104 ntBASIC1.3□□□□□ -2.2
GMDSO60547 AC087477.1-201ENST00000465747 340 ntBASIC1.3□□□□□ -2.2
GMDSO60547 Y_RNA.675-201ENST00000516389 149 ntBASIC1.3□□□□□ -2.2
GMDSO60547 SNORA31.17-201ENST00000516953 127 ntBASIC1.3□□□□□ -2.2
GMDSO60547 SUB1P4-201ENST00000566062 339 ntBASIC1.3□□□□□ -2.2
GMDSO60547 AC002400.1-201ENST00000569310 726 ntBASIC1.3□□□□□ -2.2
GMDSO60547 AC103987.3-201ENST00000582071 292 ntBASIC1.3□□□□□ -2.2
GMDSO60547 PRR13P7-201ENST00000605538 430 ntBASIC1.3□□□□□ -2.2
GMDSO60547 RNU6-87P-201ENST00000607561 108 ntBASIC1.3□□□□□ -2.2
GMDSO60547 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.3□□□□□ -2.2
GMDSO60547 MIR7843-201ENST00000622274 79 ntBASIC1.3□□□□□ -2.2
GMDSO60547 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
GMDSO60547 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.29□□□□□ -2.2
GMDSO60547 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
GMDSO60547 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.29□□□□□ -2.2
GMDSO60547 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.29□□□□□ -2.2
GMDSO60547 RNU1-42P-201ENST00000364033 160 ntBASIC1.29□□□□□ -2.2
GMDSO60547 SNORA67.6-201ENST00000391093 99 ntBASIC1.29□□□□□ -2.2
GMDSO60547 MIR1267-201ENST00000408723 78 ntBASIC1.29□□□□□ -2.2
GMDSO60547 RNU2-39P-201ENST00000410604 198 ntBASIC1.29□□□□□ -2.2
GMDSO60547 RNU6-387P-201ENST00000411331 105 ntBASIC1.29□□□□□ -2.2
GMDSO60547 RNA5SP111-201ENST00000411386 101 ntBASIC1.29□□□□□ -2.2
GMDSO60547 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.29□□□□□ -2.2
GMDSO60547 MED13P1-201ENST00000428342 171 ntBASIC1.29□□□□□ -2.2
GMDSO60547 VN1R108P-201ENST00000431580 830 ntBASIC1.29□□□□□ -2.2
GMDSO60547 RPS24P1-201ENST00000438550 371 ntBASIC1.29□□□□□ -2.2
GMDSO60547 SNORD13-201ENST00000459299 104 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms