Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PEX1O43933 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PEX1O43933 RNA5SP50-201ENST00000363731 107 ntBASIC3.29□□□□□ -1.88
PEX1O43933 RNA5SP72-201ENST00000364442 117 ntBASIC3.29□□□□□ -1.88
PEX1O43933 Y_RNA.333-201ENST00000365274 102 ntBASIC3.29□□□□□ -1.88
PEX1O43933 Y_RNA.424-201ENST00000384063 103 ntBASIC3.29□□□□□ -1.88
PEX1O43933 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PEX1O43933 MIR1302-3-201ENST00000408128 138 ntBASIC3.29□□□□□ -1.88
PEX1O43933 SNORA11.1-201ENST00000408133 129 ntBASIC3.29□□□□□ -1.88
PEX1O43933 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.29□□□□□ -1.88
PEX1O43933 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.29□□□□□ -1.88
PEX1O43933 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.29□□□□□ -1.88
PEX1O43933 SNRPEP9-201ENST00000436794 238 ntBASIC3.29□□□□□ -1.88
PEX1O43933 Z82210.1-201ENST00000440037 231 ntBASIC3.29□□□□□ -1.88
PEX1O43933 AC013470.1-201ENST00000453438 462 ntBASIC3.29□□□□□ -1.88
PEX1O43933 RNU7-169P-201ENST00000459456 61 ntBASIC3.29□□□□□ -1.88
PEX1O43933 AC133134.1-201ENST00000466800 359 ntBASIC3.29□□□□□ -1.88
PEX1O43933 RPL22P13-201ENST00000493291 347 ntBASIC3.29□□□□□ -1.88
PEX1O43933 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.29□□□□□ -1.88
PEX1O43933 AC131281.1-201ENST00000522984 164 ntBASIC3.29□□□□□ -1.88
PEX1O43933 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.29□□□□□ -1.88
PEX1O43933 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.29□□□□□ -1.88
PEX1O43933 MIR5696-201ENST00000578474 85 ntBASIC3.29□□□□□ -1.88
PEX1O43933 MIR5701-3-201ENST00000578890 82 ntBASIC3.29□□□□□ -1.88
PEX1O43933 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.29□□□□□ -1.88
PEX1O43933 MIR5701-1-201ENST00000585138 82 ntBASIC3.29□□□□□ -1.88
PEX1O43933 AP000787.2-201ENST00000604432 568 ntBASIC3.29□□□□□ -1.88
PEX1O43933 AL021879.1-201ENST00000611756 288 ntBASIC3.29□□□□□ -1.88
PEX1O43933 AC107871.2-201ENST00000612894 502 ntBASIC3.29□□□□□ -1.88
PEX1O43933 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.29□□□□□ -1.88
PEX1O43933 MIR5701-2-201ENST00000615634 82 ntBASIC3.29□□□□□ -1.88
PEX1O43933 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.29□□□□□ -1.88
PEX1O43933 AL359693.1-201ENST00000614959 2407 ntBASIC3.29□□□□□ -1.88
PEX1O43933 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
PEX1O43933 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PEX1O43933 AC103988.1-201ENST00000566382 2177 ntBASIC3.28□□□□□ -1.88
PEX1O43933 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.28□□□□□ -1.88
PEX1O43933 AC093908.1-201ENST00000623125 8092 ntBASIC3.28□□□□□ -1.88
PEX1O43933 SNORD50.1-201ENST00000362987 71 ntBASIC3.28□□□□□ -1.88
PEX1O43933 Y_RNA.210-201ENST00000364161 110 ntBASIC3.28□□□□□ -1.88
PEX1O43933 RNU6-1318P-201ENST00000365389 103 ntBASIC3.28□□□□□ -1.88
PEX1O43933 SNORA63.7-201ENST00000365579 123 ntBASIC3.28□□□□□ -1.88
PEX1O43933 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.28□□□□□ -1.88
PEX1O43933 AC092047.1-201ENST00000424997 240 ntBASIC3.28□□□□□ -1.88
PEX1O43933 RPL21P40-201ENST00000428586 483 ntBASIC3.28□□□□□ -1.88
PEX1O43933 MTND3P9-201ENST00000429526 346 ntBASIC3.28□□□□□ -1.88
PEX1O43933 RPS15AP10-201ENST00000432472 382 ntBASIC3.28□□□□□ -1.88
PEX1O43933 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.28□□□□□ -1.88
PEX1O43933 AL078601.1-201ENST00000444542 271 ntBASIC3.28□□□□□ -1.88
PEX1O43933 OR2AQ1P-201ENST00000451972 200 ntBASIC3.28□□□□□ -1.88
PEX1O43933 RPS29P27-201ENST00000463711 170 ntBASIC3.28□□□□□ -1.88
PEX1O43933 AK3P2-201ENST00000507976 429 ntBASIC3.28□□□□□ -1.88
PEX1O43933 RNU1-143P-201ENST00000516296 146 ntBASIC3.28□□□□□ -1.88
PEX1O43933 SNORA70.18-201ENST00000516696 98 ntBASIC3.28□□□□□ -1.88
PEX1O43933 AC022616.4-201ENST00000522985 181 ntBASIC3.28□□□□□ -1.88
PEX1O43933 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.28□□□□□ -1.88
PEX1O43933 MYL12BP1-201ENST00000569826 507 ntBASIC3.28□□□□□ -1.88
PEX1O43933 AL355297.3-201ENST00000604082 446 ntBASIC3.28□□□□□ -1.88
PEX1O43933 AC005046.1-201ENST00000608515 625 ntBASIC3.28□□□□□ -1.88
PEX1O43933 U1.23-201ENST00000610293 146 ntBASIC3.28□□□□□ -1.88
PEX1O43933 RNU1-68P-201ENST00000615382 146 ntBASIC3.28□□□□□ -1.88
PEX1O43933 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.28□□□□□ -1.88
PEX1O43933 U1.39-201ENST00000621562 146 ntBASIC3.28□□□□□ -1.88
PEX1O43933 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.28□□□□□ -1.88
PEX1O43933 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
PEX1O43933 AC032011.1-201ENST00000611703 1549 ntBASIC3.28□□□□□ -1.88
PEX1O43933 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
PEX1O43933 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PEX1O43933 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PEX1O43933 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.27□□□□□ -1.89
PEX1O43933 FTLP6-201ENST00000355274 422 ntBASIC3.27□□□□□ -1.89
PEX1O43933 SNORD14.1-201ENST00000365609 90 ntBASIC3.27□□□□□ -1.89
PEX1O43933 Z98749.2-208ENST00000381646 500 ntBASIC3.27□□□□□ -1.89
PEX1O43933 MT-TG-201ENST00000387429 68 ntBASIC3.27□□□□□ -1.89
PEX1O43933 MIR1252-201ENST00000408861 65 ntBASIC3.27□□□□□ -1.89
PEX1O43933 AL356968.1-201ENST00000416622 474 ntBASIC3.27□□□□□ -1.89
PEX1O43933 AC098614.2-201ENST00000426040 255 ntBASIC3.27□□□□□ -1.89
PEX1O43933 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.27□□□□□ -1.89
PEX1O43933 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PEX1O43933 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.27□□□□□ -1.89
PEX1O43933 SNORA40.14-201ENST00000516543 86 ntBASIC3.27□□□□□ -1.89
PEX1O43933 RN7SKP282-201ENST00000516824 299 ntBASIC3.27□□□□□ -1.89
PEX1O43933 RNU6-612P-201ENST00000516909 102 ntBASIC3.27□□□□□ -1.89
PEX1O43933 Y_RNA.715-201ENST00000517082 110 ntBASIC3.27□□□□□ -1.89
PEX1O43933 RNA5SP291-201ENST00000517222 105 ntBASIC3.27□□□□□ -1.89
PEX1O43933 SCARNA20.6-201ENST00000517251 106 ntBASIC3.27□□□□□ -1.89
PEX1O43933 AC009812.2-201ENST00000517657 457 ntBASIC3.27□□□□□ -1.89
PEX1O43933 AP005902.1-201ENST00000521358 186 ntBASIC3.27□□□□□ -1.89
PEX1O43933 CASP1P1-201ENST00000526345 212 ntBASIC3.27□□□□□ -1.89
PEX1O43933 AC040926.1-201ENST00000530195 238 ntBASIC3.27□□□□□ -1.89
PEX1O43933 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.27□□□□□ -1.89
PEX1O43933 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.27□□□□□ -1.89
PEX1O43933 AC004584.2-201ENST00000570407 410 ntBASIC3.27□□□□□ -1.89
PEX1O43933 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.27□□□□□ -1.89
PEX1O43933 AL645944.1-201ENST00000603857 493 ntBASIC3.27□□□□□ -1.89
PEX1O43933 Z98751.3-201ENST00000604447 521 ntBASIC3.27□□□□□ -1.89
PEX1O43933 AC012468.1-201ENST00000604888 430 ntBASIC3.27□□□□□ -1.89
PEX1O43933 AC007179.3-201ENST00000604976 235 ntBASIC3.27□□□□□ -1.89
PEX1O43933 MIR8076-201ENST00000611401 83 ntBASIC3.27□□□□□ -1.89
PEX1O43933 MIR7975-201ENST00000619350 68 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms