Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.05□□□□□ -1.6
ACTN4O43707 RPL23AP93-201ENST00000440847 484 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 RPS29P24-201ENST00000486345 171 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 RNU6-537P-201ENST00000517277 103 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 IGLV3-26-201ENST00000520756 302 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.05□□□□□ -1.6
ACTN4O43707 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.05□□□□□ -1.6
ACTN4O43707 MIR6891-201ENST00000618788 93 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ACTN4O43707 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.05□□□□□ -1.6
ACTN4O43707 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ACTN4O43707 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ACTN4O43707 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ACTN4O43707 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.04□□□□□ -1.6
ACTN4O43707 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ACTN4O43707 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.04□□□□□ -1.6
ACTN4O43707 U3.9-201ENST00000363823 204 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 RNA5SP22-201ENST00000365393 109 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 MIR325-201ENST00000385260 98 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 MIR548A3-201ENST00000385297 97 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ACTN4O43707 SDHCP2-201ENST00000398565 501 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 AL133270.1-201ENST00000402635 279 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 RNA5SP146-201ENST00000410743 123 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 SNORA74C-2-201ENST00000411179 201 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC5.04□□□□□ -1.6
ACTN4O43707 AC244098.2-201ENST00000422068 99 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 AL590762.4-201ENST00000425885 253 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 RPL37P4-201ENST00000448908 268 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 AC012308.1-201ENST00000451232 178 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 RNU7-141P-201ENST00000459304 62 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 RNU6-1061P-201ENST00000516530 99 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 Y_RNA.692-201ENST00000516627 105 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 SNORA31.16-201ENST00000516773 139 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 CKS1BP7-201ENST00000522230 235 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC5.04□□□□□ -1.6
ACTN4O43707 RPL23AP97-201ENST00000568955 471 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 RN7SL690P-201ENST00000582087 240 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 AL160290.3-201ENST00000604869 165 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 snoZ196.1-201ENST00000625269 89 ntBASIC5.04□□□□□ -1.6
ACTN4O43707 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ACTN4O43707 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ACTN4O43707 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
ACTN4O43707 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ACTN4O43707 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN4O43707 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.03□□□□□ -1.6
ACTN4O43707 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.03□□□□□ -1.6
ACTN4O43707 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN4O43707 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN4O43707 NOL8P1-201ENST00000508336 3529 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 Y_RNA.35-201ENST00000362601 101 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 RNA5SP307-201ENST00000362863 116 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 RNU6-1082P-201ENST00000364574 107 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 SNORA71.2-201ENST00000364941 134 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 AC068538.1-201ENST00000376856 336 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 RNA5SP397-201ENST00000391323 118 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 MIR208B-201ENST00000401172 77 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.03□□□□□ -1.6
ACTN4O43707 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.03□□□□□ -1.6
ACTN4O43707 RPL31P41-201ENST00000477967 372 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 FAM25E-202ENST00000608562 189 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 U2.21-201ENST00000637295 81 ntBASIC5.03□□□□□ -1.6
ACTN4O43707 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.03□□□□□ -1.6
ACTN4O43707 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.03□□□□□ -1.6
ACTN4O43707 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
ACTN4O43707 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ACTN4O43707 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.02□□□□□ -1.61
ACTN4O43707 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ACTN4O43707 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ACTN4O43707 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
ACTN4O43707 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTN4O43707 MIR450A1-201ENST00000362262 91 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 RNU6-778P-201ENST00000363269 103 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 Y_RNA.456-201ENST00000384232 111 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 AL512604.1-201ENST00000404812 257 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 HMGN2P30-201ENST00000423237 256 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 AC092047.1-201ENST00000424997 240 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 RPL12P3-201ENST00000440080 396 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 AL158147.1-201ENST00000443970 75 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.02□□□□□ -1.61
ACTN4O43707 AC012671.1-201ENST00000451912 203 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 AC090525.1-201ENST00000479116 478 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.02□□□□□ -1.61
ACTN4O43707 Y_RNA.677-201ENST00000516401 85 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ACTN4O43707 CYP4A27P-201ENST00000567218 190 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 AC011471.1-201ENST00000585766 187 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 AL162713.1-201ENST00000604480 262 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.02□□□□□ -1.61
ACTN4O43707 LINC00901.1-201ENST00000617252 152 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 AC012640.5-201ENST00000623897 319 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 AC007546.2-201ENST00000623996 360 ntBASIC5.02□□□□□ -1.61
ACTN4O43707 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
ACTN4O43707 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.02□□□□□ -1.61
ACTN4O43707 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ACTN4O43707 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
ACTN4O43707 RNU6-144P-201ENST00000383951 107 ntBASIC5.01□□□□□ -1.61
ACTN4O43707 RNU1-73P-201ENST00000383971 164 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms