Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.86□□□□□ -1.95
LDB2O43679 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.86□□□□□ -1.95
LDB2O43679 SNORA5B-201ENST00000363786 132 ntBASIC2.86□□□□□ -1.95
LDB2O43679 SNORA14A-201ENST00000364773 135 ntBASIC2.86□□□□□ -1.95
LDB2O43679 DYNLT3P1-201ENST00000378574 347 ntBASIC2.86□□□□□ -1.95
LDB2O43679 RNU6-1227P-201ENST00000383981 107 ntBASIC2.86□□□□□ -1.95
LDB2O43679 RNU6-306P-201ENST00000384617 107 ntBASIC2.86□□□□□ -1.95
LDB2O43679 MIR181A2-201ENST00000384863 110 ntBASIC2.86□□□□□ -1.95
LDB2O43679 MIR512-1-201ENST00000384913 84 ntBASIC2.86□□□□□ -1.95
LDB2O43679 MIR181B1-201ENST00000385240 110 ntBASIC2.86□□□□□ -1.95
LDB2O43679 Y_RNA.579-201ENST00000390939 94 ntBASIC2.86□□□□□ -1.95
LDB2O43679 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.86□□□□□ -1.95
LDB2O43679 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.86□□□□□ -1.95
LDB2O43679 AL031274.1-201ENST00000450334 232 ntBASIC2.86□□□□□ -1.95
LDB2O43679 BTF3P15-201ENST00000455606 336 ntBASIC2.86□□□□□ -1.95
LDB2O43679 RPL26P9-201ENST00000457466 433 ntBASIC2.86□□□□□ -1.95
LDB2O43679 AC128713.1-201ENST00000471495 306 ntBASIC2.86□□□□□ -1.95
LDB2O43679 RPS27AP10-201ENST00000496103 208 ntBASIC2.86□□□□□ -1.95
LDB2O43679 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.86□□□□□ -1.95
LDB2O43679 AC026782.1-201ENST00000512952 449 ntBASIC2.86□□□□□ -1.95
LDB2O43679 Y_RNA.687-201ENST00000516558 91 ntBASIC2.86□□□□□ -1.95
LDB2O43679 Y_RNA.708-201ENST00000516950 96 ntBASIC2.86□□□□□ -1.95
LDB2O43679 AC109479.2-201ENST00000517842 174 ntBASIC2.86□□□□□ -1.95
LDB2O43679 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.86□□□□□ -1.95
LDB2O43679 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.86□□□□□ -1.95
LDB2O43679 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.86□□□□□ -1.95
LDB2O43679 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.86□□□□□ -1.95
LDB2O43679 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.86□□□□□ -1.95
LDB2O43679 AL121917.1-203ENST00000605534 577 ntBASIC2.86□□□□□ -1.95
LDB2O43679 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.86□□□□□ -1.95
LDB2O43679 AC133104.2-201ENST00000615272 193 ntBASIC2.86□□□□□ -1.95
LDB2O43679 AL138880.2-201ENST00000616214 239 ntBASIC2.86□□□□□ -1.95
LDB2O43679 AC090971.5-201ENST00000621102 293 ntBASIC2.86□□□□□ -1.95
LDB2O43679 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LDB2O43679 AL669831.3-213ENST00000636676 183 ntBASIC2.86□□□□□ -1.95
LDB2O43679 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LDB2O43679 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LDB2O43679 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
LDB2O43679 MAPK10-322ENST00000641485 4530 ntBASIC2.85□□□□□ -1.95
LDB2O43679 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LDB2O43679 SNORA51.4-201ENST00000364993 124 ntBASIC2.85□□□□□ -1.95
LDB2O43679 MIR518D-201ENST00000385014 87 ntBASIC2.85□□□□□ -1.95
LDB2O43679 SNORA11.2-201ENST00000408318 127 ntBASIC2.85□□□□□ -1.95
LDB2O43679 U3.37-201ENST00000408528 213 ntBASIC2.85□□□□□ -1.95
LDB2O43679 RNA5SP38-201ENST00000410750 119 ntBASIC2.85□□□□□ -1.95
LDB2O43679 RNU6-1304P-201ENST00000411374 106 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AL030996.1-201ENST00000411430 235 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AC016831.2-201ENST00000417179 352 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AL117339.3-201ENST00000418733 162 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.85□□□□□ -1.95
LDB2O43679 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.85□□□□□ -1.95
LDB2O43679 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.85□□□□□ -1.95
LDB2O43679 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.85□□□□□ -1.95
LDB2O43679 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LDB2O43679 NIPA2P5-201ENST00000452282 464 ntBASIC2.85□□□□□ -1.95
LDB2O43679 ELOCP24-201ENST00000456370 334 ntBASIC2.85□□□□□ -1.95
LDB2O43679 RNU6-1037P-201ENST00000459571 107 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AC005741.1-201ENST00000511094 432 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AC113155.1-201ENST00000511141 769 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.85□□□□□ -1.95
LDB2O43679 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LDB2O43679 NACAP3-201ENST00000552100 481 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AL442663.2-201ENST00000554385 511 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AL391261.3-201ENST00000557194 520 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AC018462.2-201ENST00000605375 395 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AC080078.3-201ENST00000605407 463 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AP000654.2-201ENST00000605633 586 ntBASIC2.85□□□□□ -1.95
LDB2O43679 PISRT1.1-201ENST00000616930 107 ntBASIC2.85□□□□□ -1.95
LDB2O43679 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.85□□□□□ -1.95
LDB2O43679 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.85□□□□□ -1.95
LDB2O43679 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.85□□□□□ -1.95
LDB2O43679 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LDB2O43679 MTND4P23-201ENST00000447723 1363 ntBASIC2.85□□□□□ -1.95
LDB2O43679 AC092593.1-201ENST00000515413 1815 ntBASIC2.84□□□□□ -1.95
LDB2O43679 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
LDB2O43679 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.84□□□□□ -1.95
LDB2O43679 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
LDB2O43679 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LDB2O43679 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LDB2O43679 Y_RNA.151-201ENST00000363566 112 ntBASIC2.84□□□□□ -1.95
LDB2O43679 Y_RNA.187-201ENST00000363918 113 ntBASIC2.84□□□□□ -1.95
LDB2O43679 RNU5E-7P-201ENST00000365290 117 ntBASIC2.84□□□□□ -1.95
LDB2O43679 RNU6-827P-201ENST00000365553 106 ntBASIC2.84□□□□□ -1.95
LDB2O43679 MIR517A-201ENST00000385001 87 ntBASIC2.84□□□□□ -1.95
LDB2O43679 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
LDB2O43679 SNORA75.4-201ENST00000391278 119 ntBASIC2.84□□□□□ -1.95
LDB2O43679 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LDB2O43679 Y_RNA.594-201ENST00000410373 140 ntBASIC2.84□□□□□ -1.95
LDB2O43679 RNU6-1050P-201ENST00000410388 107 ntBASIC2.84□□□□□ -1.95
LDB2O43679 AC005534.2-201ENST00000431047 433 ntBASIC2.84□□□□□ -1.95
LDB2O43679 RPS15AP10-201ENST00000432472 382 ntBASIC2.84□□□□□ -1.95
LDB2O43679 AC098831.1-201ENST00000440661 216 ntBASIC2.84□□□□□ -1.95
LDB2O43679 HIGD1AP2-201ENST00000446367 280 ntBASIC2.84□□□□□ -1.95
LDB2O43679 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.84□□□□□ -1.95
LDB2O43679 AC013470.1-201ENST00000453438 462 ntBASIC2.84□□□□□ -1.95
LDB2O43679 PCMTD1P1-201ENST00000455560 355 ntBASIC2.84□□□□□ -1.95
LDB2O43679 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.84□□□□□ -1.95
LDB2O43679 SNORD5.1-201ENST00000458800 75 ntBASIC2.84□□□□□ -1.95
LDB2O43679 snoU109.2-201ENST00000459316 135 ntBASIC2.84□□□□□ -1.95
LDB2O43679 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms