Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC012360.2-201ENST00000609349 391 ntBASIC1.63□□□□□ -2.15
CHMP2AO43633 uc_338.15-201ENST00000615470 191 ntBASIC1.63□□□□□ -2.15
CHMP2AO43633 AC092656.1-203ENST00000624134 423 ntBASIC1.63□□□□□ -2.15
CHMP2AO43633 AC006927.3-201ENST00000638789 384 ntBASIC1.63□□□□□ -2.15
CHMP2AO43633 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.62□□□□□ -2.15
CHMP2AO43633 RNU6-529P-201ENST00000363383 104 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 RNU6-384P-201ENST00000364900 104 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.62□□□□□ -2.15
CHMP2AO43633 MIR29C-201ENST00000385231 88 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 RNA5SP465-201ENST00000391195 109 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 FGF7P8-201ENST00000402994 292 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 UBE2V1P10-201ENST00000414685 269 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 AP1B1P2-201ENST00000416196 106 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.62□□□□□ -2.15
CHMP2AO43633 AC010099.3-201ENST00000423896 409 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 AC012308.1-201ENST00000451232 178 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.62□□□□□ -2.15
CHMP2AO43633 AC021146.2-201ENST00000504736 556 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.62□□□□□ -2.15
CHMP2AO43633 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.62□□□□□ -2.15
CHMP2AO43633 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.62□□□□□ -2.15
CHMP2AO43633 RNU7-51P-201ENST00000516560 62 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 RNU6-965P-201ENST00000516721 96 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 AC022616.3-201ENST00000523940 148 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 AC004223.4-201ENST00000612426 332 ntBASIC1.62□□□□□ -2.15
CHMP2AO43633 Y_RNA.40-201ENST00000362645 93 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 RNU6-743P-201ENST00000364151 106 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 SNORA72.3-201ENST00000365074 132 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 RNU6-546P-201ENST00000383991 107 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 MIR10A-201ENST00000385043 110 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 Y_RNA.623-201ENST00000411128 95 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AC009518.2-201ENST00000418056 731 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AL365338.1-201ENST00000422282 858 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AC119618.1-201ENST00000434191 222 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.61□□□□□ -2.15
CHMP2AO43633 SNRPGP13-201ENST00000442212 177 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 TAF9P1-201ENST00000445421 515 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 TAF9P2-201ENST00000454958 515 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.61□□□□□ -2.15
CHMP2AO43633 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 PTP4A1P4-201ENST00000512479 322 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 RNU1-86P-201ENST00000516108 154 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 SCARNA24.1-201ENST00000516465 137 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 RNU1-107P-201ENST00000516617 154 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 RNU2-46P-201ENST00000517038 113 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.61□□□□□ -2.15
CHMP2AO43633 MTND1P24-201ENST00000552175 861 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AL161670.1-201ENST00000554348 137 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.61□□□□□ -2.15
CHMP2AO43633 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHMP2AO43633 AC112191.3-201ENST00000604371 277 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AC016925.2-201ENST00000605108 242 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.61□□□□□ -2.15
CHMP2AO43633 AC138749.5-201ENST00000611461 208 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.61□□□□□ -2.15
CHMP2AO43633 AC012409.4-201ENST00000612923 249 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AC116165.2-201ENST00000616705 206 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AL132822.1-201ENST00000617063 513 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AL391262.2-201ENST00000622466 494 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AC068787.1-201ENST00000623908 691 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AL359740.1-201ENST00000624340 592 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CHMP2AO43633 ZNF209P-201ENST00000593450 2304 ntBASIC1.61□□□□□ -2.15
CHMP2AO43633 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
CHMP2AO43633 RNU6-1010P-201ENST00000362757 107 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 RNU6-944P-201ENST00000364023 107 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 RNU6-1164P-201ENST00000364428 107 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 SNORD14B-201ENST00000364533 90 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 SNORD14D-201ENST00000384390 87 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 RN7SKP51-201ENST00000410781 304 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 EEF1A1P40-201ENST00000412883 573 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.6□□□□□ -2.15
CHMP2AO43633 ELOCP4-201ENST00000420090 333 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 EIF4EP2-201ENST00000422816 654 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.6□□□□□ -2.15
CHMP2AO43633 UBE2D3P4-201ENST00000441973 436 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 AL360271.2-201ENST00000447710 161 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 USP9YP12-201ENST00000450481 570 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 MTCYBP1-201ENST00000454315 1119 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 Y_RNA.687-201ENST00000516558 91 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 AC087441.2-201ENST00000529141 262 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 AP005435.4-201ENST00000529514 284 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.6□□□□□ -2.15
CHMP2AO43633 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.6□□□□□ -2.15
CHMP2AO43633 AC005771.1-201ENST00000585581 349 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 AC010928.2-201ENST00000588017 287 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 AC012065.4-201ENST00000602445 679 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 AL022154.1-201ENST00000604698 785 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 RNU6-87P-201ENST00000607561 108 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.6□□□□□ -2.15
CHMP2AO43633 AC091304.9-201ENST00000612091 226 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 MIR7844-201ENST00000616161 122 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 AC009159.2-201ENST00000617603 606 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 AC131159.1-201ENST00000621854 213 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 AL157786.1-207ENST00000627771 695 ntBASIC1.6□□□□□ -2.15
CHMP2AO43633 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.6□□□□□ -2.15
CHMP2AO43633 AP000648.3-201ENST00000623539 4507 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms