Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RAP1BP3-201ENST00000407180 549 ntBASIC1.19□□□□□ -2.22
SGCEO43556 RNU2-41P-201ENST00000410991 178 ntBASIC1.19□□□□□ -2.22
SGCEO43556 DUXAP8-207ENST00000456786 622 ntBASIC1.19□□□□□ -2.22
SGCEO43556 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.19□□□□□ -2.22
SGCEO43556 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.19□□□□□ -2.22
SGCEO43556 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.19□□□□□ -2.22
SGCEO43556 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.19□□□□□ -2.22
SGCEO43556 AL356057.1-201ENST00000533798 831 ntBASIC1.19□□□□□ -2.22
SGCEO43556 ADI1P3-201ENST00000549509 470 ntBASIC1.19□□□□□ -2.22
SGCEO43556 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.19□□□□□ -2.22
SGCEO43556 AC091135.1-201ENST00000585943 307 ntBASIC1.19□□□□□ -2.22
SGCEO43556 AL158042.1-201ENST00000605338 460 ntBASIC1.19□□□□□ -2.22
SGCEO43556 AL590240.4-201ENST00000616908 390 ntBASIC1.19□□□□□ -2.22
SGCEO43556 AL353997.5-201ENST00000618886 171 ntBASIC1.19□□□□□ -2.22
SGCEO43556 AL138960.2-201ENST00000625145 535 ntBASIC1.19□□□□□ -2.22
SGCEO43556 AL445523.1-201ENST00000451184 1362 ntBASIC1.19□□□□□ -2.22
SGCEO43556 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.19□□□□□ -2.22
SGCEO43556 ZNF72P-201ENST00000425869 1908 ntBASIC1.19□□□□□ -2.22
SGCEO43556 RNY4P16-201ENST00000364768 94 ntBASIC1.18□□□□□ -2.22
SGCEO43556 RNU6-1179P-201ENST00000384667 107 ntBASIC1.18□□□□□ -2.22
SGCEO43556 RPS20P2-201ENST00000402520 389 ntBASIC1.18□□□□□ -2.22
SGCEO43556 AC019070.1-201ENST00000415008 1024 ntBASIC1.18□□□□□ -2.22
SGCEO43556 CR769776.1-201ENST00000441254 787 ntBASIC1.18□□□□□ -2.22
SGCEO43556 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.18□□□□□ -2.22
SGCEO43556 RPL39P29-201ENST00000447779 157 ntBASIC1.18□□□□□ -2.22
SGCEO43556 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SGCEO43556 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.18□□□□□ -2.22
SGCEO43556 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.18□□□□□ -2.22
SGCEO43556 RNU1-131P-201ENST00000458943 161 ntBASIC1.18□□□□□ -2.22
SGCEO43556 AC009646.1-201ENST00000510455 318 ntBASIC1.18□□□□□ -2.22
SGCEO43556 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.18□□□□□ -2.22
SGCEO43556 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.18□□□□□ -2.22
SGCEO43556 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.18□□□□□ -2.22
SGCEO43556 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.18□□□□□ -2.22
SGCEO43556 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SGCEO43556 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.18□□□□□ -2.22
SGCEO43556 AL158032.1-201ENST00000605401 106 ntBASIC1.18□□□□□ -2.22
SGCEO43556 AL512598.1-201ENST00000610158 273 ntBASIC1.18□□□□□ -2.22
SGCEO43556 AL121890.5-201ENST00000620848 304 ntBASIC1.18□□□□□ -2.22
SGCEO43556 AC245060.5-201ENST00000610778 3293 ntBASIC1.18□□□□□ -2.22
SGCEO43556 AP000560.1-201ENST00000624150 1937 ntBASIC1.18□□□□□ -2.22
SGCEO43556 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SGCEO43556 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.18□□□□□ -2.22
SGCEO43556 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
SGCEO43556 MIR758-201ENST00000390227 88 ntBASIC1.17□□□□□ -2.22
SGCEO43556 SNORA17.3-201ENST00000391159 129 ntBASIC1.17□□□□□ -2.22
SGCEO43556 MTND4P20-201ENST00000424125 869 ntBASIC1.17□□□□□ -2.22
SGCEO43556 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.17□□□□□ -2.22
SGCEO43556 HMGB1P31-201ENST00000437242 427 ntBASIC1.17□□□□□ -2.22
SGCEO43556 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.17□□□□□ -2.22
SGCEO43556 AC079448.1-201ENST00000449377 373 ntBASIC1.17□□□□□ -2.22
SGCEO43556 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.17□□□□□ -2.22
SGCEO43556 MTND1P12-201ENST00000455231 147 ntBASIC1.17□□□□□ -2.22
SGCEO43556 RPS26P55-201ENST00000471178 356 ntBASIC1.17□□□□□ -2.22
SGCEO43556 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.17□□□□□ -2.22
SGCEO43556 MIR4298-201ENST00000584380 73 ntBASIC1.17□□□□□ -2.22
SGCEO43556 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SGCEO43556 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SGCEO43556 RNU6-112P-201ENST00000363599 104 ntBASIC1.16□□□□□ -2.22
SGCEO43556 SNORD114-6-201ENST00000364393 72 ntBASIC1.16□□□□□ -2.22
SGCEO43556 RNU6-939P-201ENST00000384634 107 ntBASIC1.16□□□□□ -2.22
SGCEO43556 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.16□□□□□ -2.22
SGCEO43556 FTH1P12-201ENST00000432137 551 ntBASIC1.16□□□□□ -2.22
SGCEO43556 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.16□□□□□ -2.22
SGCEO43556 AC015922.2-201ENST00000435593 184 ntBASIC1.16□□□□□ -2.22
SGCEO43556 RNU1-123P-201ENST00000458950 160 ntBASIC1.16□□□□□ -2.22
SGCEO43556 AC130509.1-201ENST00000464158 433 ntBASIC1.16□□□□□ -2.22
SGCEO43556 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.16□□□□□ -2.22
SGCEO43556 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.16□□□□□ -2.22
SGCEO43556 MTCYBP18-201ENST00000501056 747 ntBASIC1.16□□□□□ -2.22
SGCEO43556 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.16□□□□□ -2.22
SGCEO43556 AC107934.1-201ENST00000522215 217 ntBASIC1.16□□□□□ -2.22
SGCEO43556 AC115990.1-201ENST00000526957 301 ntBASIC1.16□□□□□ -2.22
SGCEO43556 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.16□□□□□ -2.22
SGCEO43556 SNORA77B-201ENST00000578179 125 ntBASIC1.16□□□□□ -2.22
SGCEO43556 AP002360.4-201ENST00000606980 481 ntBASIC1.16□□□□□ -2.22
SGCEO43556 MIR6715A-201ENST00000615929 79 ntBASIC1.16□□□□□ -2.22
SGCEO43556 AC026585.1-201ENST00000619582 524 ntBASIC1.16□□□□□ -2.22
SGCEO43556 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SGCEO43556 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.16□□□□□ -2.22
SGCEO43556 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SGCEO43556 SNORD33-201ENST00000362761 85 ntBASIC1.15□□□□□ -2.23
SGCEO43556 RNU6-757P-201ENST00000410334 100 ntBASIC1.15□□□□□ -2.23
SGCEO43556 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.15□□□□□ -2.23
SGCEO43556 AL589872.1-201ENST00000426602 288 ntBASIC1.15□□□□□ -2.23
SGCEO43556 UBE2V1P8-201ENST00000437166 265 ntBASIC1.15□□□□□ -2.23
SGCEO43556 AL121601.2-201ENST00000438019 707 ntBASIC1.15□□□□□ -2.23
SGCEO43556 MTND5P2-201ENST00000442927 1142 ntBASIC1.15□□□□□ -2.23
SGCEO43556 MTND2P4-201ENST00000445034 1004 ntBASIC1.15□□□□□ -2.23
SGCEO43556 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.15□□□□□ -2.23
SGCEO43556 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.15□□□□□ -2.23
SGCEO43556 AL122001.1-201ENST00000457027 370 ntBASIC1.15□□□□□ -2.23
SGCEO43556 RN7SKP210-201ENST00000459176 261 ntBASIC1.15□□□□□ -2.23
SGCEO43556 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.15□□□□□ -2.23
SGCEO43556 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
SGCEO43556 RNA5SP490-201ENST00000517141 136 ntBASIC1.15□□□□□ -2.23
SGCEO43556 AC105185.1-201ENST00000518705 535 ntBASIC1.15□□□□□ -2.23
SGCEO43556 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.15□□□□□ -2.23
SGCEO43556 DNAJC19P9-201ENST00000555084 351 ntBASIC1.15□□□□□ -2.23
SGCEO43556 AC005668.1-201ENST00000571142 476 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms