Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 HMGB1P18-201ENST00000438801 619 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 AL513043.1-201ENST00000439124 535 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 RPL23AP58-201ENST00000440453 469 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
PRPF3O43395 AC092436.3-201ENST00000511788 257 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 AC115990.1-201ENST00000526957 301 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 AC090897.2-201ENST00000581715 130 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.4□□□□□ -1.87
PRPF3O43395 RPS15AP11-201ENST00000594193 385 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 ELOCP5-201ENST00000604924 333 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 AC018889.1-201ENST00000605372 397 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 AL121917.1-203ENST00000605534 577 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 AC002064.3-201ENST00000623448 346 ntBASIC3.4□□□□□ -1.87
PRPF3O43395 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRPF3O43395 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRPF3O43395 AL353743.1-202ENST00000431724 1695 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PRPF3O43395 AC000403.1-201ENST00000613696 3585 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRPF3O43395 RNU6-336P-201ENST00000364891 107 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 RNU6-1222P-201ENST00000384615 107 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 AC074085.1-201ENST00000413598 418 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 CYCSP48-201ENST00000417124 323 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 DAP3P1-201ENST00000441522 278 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.39□□□□□ -1.87
PRPF3O43395 AMD1P1-201ENST00000457220 922 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 AC130509.1-201ENST00000464158 433 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 RNA5SP385-201ENST00000515947 110 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 Y_RNA.682-201ENST00000516457 100 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 Y_RNA.691-201ENST00000516611 103 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 AC105029.1-201ENST00000520250 669 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 GLYCAM1-201ENST00000546596 285 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 AC079598.5-201ENST00000547460 117 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.39□□□□□ -1.87
PRPF3O43395 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.39□□□□□ -1.87
PRPF3O43395 FGF7P1-201ENST00000582820 288 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 AC104237.2-201ENST00000612456 443 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 AL162274.2-201ENST00000614406 332 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 AL449363.1-201ENST00000617815 186 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.39□□□□□ -1.87
PRPF3O43395 RBBP8P1-201ENST00000449447 1844 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 AC096644.4-201ENST00000563417 2912 ntBASIC3.39□□□□□ -1.87
PRPF3O43395 FAM35CP-201ENST00000554755 2470 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PRPF3O43395 Y_RNA.356-201ENST00000365475 113 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 SNORD21-201ENST00000383953 95 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 SNORA48.5-201ENST00000391143 135 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 AL030996.1-201ENST00000411430 235 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 RPL7P37-201ENST00000425095 738 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 AC007969.2-201ENST00000441891 191 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 MTND1P17-201ENST00000448961 204 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 AC107399.1-201ENST00000451226 265 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF3O43395 SNORA31.18-201ENST00000517043 134 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 AC104576.1-201ENST00000524225 88 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.38□□□□□ -1.87
PRPF3O43395 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.38□□□□□ -1.87
PRPF3O43395 MIR4513-201ENST00000581077 86 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 MIR4765-201ENST00000585007 77 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRPF3O43395 MTND4P23-201ENST00000447723 1363 ntBASIC3.38□□□□□ -1.87
PRPF3O43395 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRPF3O43395 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.37□□□□□ -1.87
PRPF3O43395 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.37□□□□□ -1.87
PRPF3O43395 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PRPF3O43395 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRPF3O43395 SNORD62.1-201ENST00000362541 86 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 SNORD56.1-201ENST00000362913 68 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 SNORA51.4-201ENST00000364993 124 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 SNORA9.2-201ENST00000365361 133 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRPF3O43395 MT-TD-201ENST00000387419 68 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 AP000275.1-201ENST00000411943 390 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 FABP5P14-201ENST00000437273 393 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 AC004383.1-201ENST00000438135 289 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 RPL36AP48-201ENST00000485521 314 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.37□□□□□ -1.87
PRPF3O43395 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.37□□□□□ -1.87
PRPF3O43395 AP005639.2-201ENST00000527592 928 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 HPRT1P3-201ENST00000539521 576 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 AC016256.1-201ENST00000547971 354 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.37□□□□□ -1.87
PRPF3O43395 AC103996.1-201ENST00000555468 102 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 MIR4790-201ENST00000577799 79 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 AC064836.2-201ENST00000609491 462 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 AC104985.2-201ENST00000620598 500 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 MTND5P19-201ENST00000424872 1794 ntBASIC3.37□□□□□ -1.87
PRPF3O43395 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PRPF3O43395 AP000560.1-201ENST00000624150 1937 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.36□□□□□ -1.87
PRPF3O43395 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.36□□□□□ -1.87
PRPF3O43395 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRPF3O43395 RPL9P7-201ENST00000330965 580 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 OR56A5-201ENST00000340110 738 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 RNU1-35P-201ENST00000362782 153 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 RNU1-140P-201ENST00000365040 165 ntBASIC3.36□□□□□ -1.87
PRPF3O43395 RNU6-851P-201ENST00000384565 107 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms