Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC007969.2-201ENST00000441891 191 ntBASIC1.24□□□□□ -2.21
UPK2O00526 RPL32P28-201ENST00000443577 397 ntBASIC1.24□□□□□ -2.21
UPK2O00526 SNORA59A-201ENST00000459326 152 ntBASIC1.24□□□□□ -2.21
UPK2O00526 MTND2P33-201ENST00000506452 1031 ntBASIC1.24□□□□□ -2.21
UPK2O00526 AC117522.1-201ENST00000509821 380 ntBASIC1.24□□□□□ -2.21
UPK2O00526 FAM206BP-201ENST00000510179 541 ntBASIC1.24□□□□□ -2.21
UPK2O00526 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.24□□□□□ -2.21
UPK2O00526 RNU6-970P-201ENST00000516312 107 ntBASIC1.24□□□□□ -2.21
UPK2O00526 RNU6-295P-201ENST00000516901 104 ntBASIC1.24□□□□□ -2.21
UPK2O00526 SNORA31.17-201ENST00000516953 127 ntBASIC1.24□□□□□ -2.21
UPK2O00526 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.24□□□□□ -2.21
UPK2O00526 PCMTD1P2-201ENST00000565017 355 ntBASIC1.24□□□□□ -2.21
UPK2O00526 AL354943.1-201ENST00000572103 781 ntBASIC1.24□□□□□ -2.21
UPK2O00526 AC011494.1-201ENST00000596454 237 ntBASIC1.24□□□□□ -2.21
UPK2O00526 AC073539.2-201ENST00000597113 165 ntBASIC1.24□□□□□ -2.21
UPK2O00526 TUSC7.1-201ENST00000610969 165 ntBASIC1.24□□□□□ -2.21
UPK2O00526 AC027807.2-201ENST00000616099 408 ntBASIC1.24□□□□□ -2.21
UPK2O00526 AC099842.1-201ENST00000619919 596 ntBASIC1.24□□□□□ -2.21
UPK2O00526 AC022306.3-201ENST00000619930 550 ntBASIC1.24□□□□□ -2.21
UPK2O00526 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.24□□□□□ -2.21
UPK2O00526 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
UPK2O00526 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.24□□□□□ -2.21
UPK2O00526 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
UPK2O00526 RNU6-527P-201ENST00000363425 104 ntBASIC1.23□□□□□ -2.21
UPK2O00526 RNU5E-7P-201ENST00000365290 117 ntBASIC1.23□□□□□ -2.21
UPK2O00526 RNU6-925P-201ENST00000384629 104 ntBASIC1.23□□□□□ -2.21
UPK2O00526 MIR1304-201ENST00000408243 91 ntBASIC1.23□□□□□ -2.21
UPK2O00526 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
UPK2O00526 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.23□□□□□ -2.21
UPK2O00526 CBX3P6-201ENST00000430257 527 ntBASIC1.23□□□□□ -2.21
UPK2O00526 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.23□□□□□ -2.21
UPK2O00526 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.23□□□□□ -2.21
UPK2O00526 AL035666.1-201ENST00000446195 348 ntBASIC1.23□□□□□ -2.21
UPK2O00526 MTCO2P29-201ENST00000465212 189 ntBASIC1.23□□□□□ -2.21
UPK2O00526 AC010409.1-201ENST00000487382 476 ntBASIC1.23□□□□□ -2.21
UPK2O00526 AC034244.1-201ENST00000507687 207 ntBASIC1.23□□□□□ -2.21
UPK2O00526 RNU5F-2P-201ENST00000516066 82 ntBASIC1.23□□□□□ -2.21
UPK2O00526 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.23□□□□□ -2.21
UPK2O00526 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.23□□□□□ -2.21
UPK2O00526 MIR3198-2-201ENST00000577868 80 ntBASIC1.23□□□□□ -2.21
UPK2O00526 MIR3169-201ENST00000578032 83 ntBASIC1.23□□□□□ -2.21
UPK2O00526 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.23□□□□□ -2.21
UPK2O00526 MIR4513-201ENST00000581077 86 ntBASIC1.23□□□□□ -2.21
UPK2O00526 AC022022.2-201ENST00000602989 360 ntBASIC1.23□□□□□ -2.21
UPK2O00526 AL136363.2-201ENST00000604173 851 ntBASIC1.23□□□□□ -2.21
UPK2O00526 AC010900.2-201ENST00000604508 210 ntBASIC1.23□□□□□ -2.21
UPK2O00526 AL121992.2-201ENST00000606262 256 ntBASIC1.23□□□□□ -2.21
UPK2O00526 BX248123.2-201ENST00000606318 124 ntBASIC1.23□□□□□ -2.21
UPK2O00526 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.23□□□□□ -2.21
UPK2O00526 AC130454.1-201ENST00000622948 401 ntBASIC1.23□□□□□ -2.21
UPK2O00526 AC120349.3-201ENST00000624377 529 ntBASIC1.23□□□□□ -2.21
UPK2O00526 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.23□□□□□ -2.21
UPK2O00526 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
UPK2O00526 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.23□□□□□ -2.21
UPK2O00526 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.23□□□□□ -2.21
UPK2O00526 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
UPK2O00526 WWP1P1-201ENST00000466609 2769 ntBASIC1.22□□□□□ -2.21
UPK2O00526 CBX3P1-201ENST00000325243 554 ntBASIC1.22□□□□□ -2.21
UPK2O00526 U8.3-201ENST00000363321 132 ntBASIC1.22□□□□□ -2.21
UPK2O00526 MIR320A-201ENST00000385302 82 ntBASIC1.22□□□□□ -2.21
UPK2O00526 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
UPK2O00526 AL033519.2-201ENST00000403958 392 ntBASIC1.22□□□□□ -2.21
UPK2O00526 RAP1BP3-201ENST00000407180 549 ntBASIC1.22□□□□□ -2.21
UPK2O00526 AC098592.1-201ENST00000419352 333 ntBASIC1.22□□□□□ -2.21
UPK2O00526 AL590556.1-201ENST00000423231 483 ntBASIC1.22□□□□□ -2.21
UPK2O00526 MED13P1-201ENST00000428342 171 ntBASIC1.22□□□□□ -2.21
UPK2O00526 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.22□□□□□ -2.21
UPK2O00526 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.22□□□□□ -2.21
UPK2O00526 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK2O00526 ART2BP-201ENST00000453501 499 ntBASIC1.22□□□□□ -2.21
UPK2O00526 AMD1P1-201ENST00000457220 922 ntBASIC1.22□□□□□ -2.21
UPK2O00526 AC130509.1-201ENST00000464158 433 ntBASIC1.22□□□□□ -2.21
UPK2O00526 AC096745.1-201ENST00000509945 370 ntBASIC1.22□□□□□ -2.21
UPK2O00526 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.22□□□□□ -2.21
UPK2O00526 MTATP6P9-201ENST00000515039 680 ntBASIC1.22□□□□□ -2.21
UPK2O00526 RNU6-311P-201ENST00000516224 102 ntBASIC1.22□□□□□ -2.21
UPK2O00526 Y_RNA.675-201ENST00000516389 149 ntBASIC1.22□□□□□ -2.21
UPK2O00526 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK2O00526 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK2O00526 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK2O00526 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.22□□□□□ -2.21
UPK2O00526 AL359999.1-201ENST00000604513 294 ntBASIC1.22□□□□□ -2.21
UPK2O00526 AC005014.3-201ENST00000605985 190 ntBASIC1.22□□□□□ -2.21
UPK2O00526 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
UPK2O00526 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.22□□□□□ -2.21
UPK2O00526 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.21□□□□□ -2.22
UPK2O00526 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
UPK2O00526 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
UPK2O00526 ZNF680P1-201ENST00000436625 1469 ntBASIC1.21□□□□□ -2.22
UPK2O00526 RNU6-160P-201ENST00000384591 107 ntBASIC1.21□□□□□ -2.22
UPK2O00526 MIR517C-201ENST00000385103 95 ntBASIC1.21□□□□□ -2.22
UPK2O00526 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
UPK2O00526 SNORA26.9-201ENST00000391322 122 ntBASIC1.21□□□□□ -2.22
UPK2O00526 MTATP6P19-201ENST00000413797 659 ntBASIC1.21□□□□□ -2.22
UPK2O00526 NCOR1P3-201ENST00000420479 303 ntBASIC1.21□□□□□ -2.22
UPK2O00526 AL591043.1-201ENST00000432461 424 ntBASIC1.21□□□□□ -2.22
UPK2O00526 AL512286.1-201ENST00000439244 400 ntBASIC1.21□□□□□ -2.22
UPK2O00526 EPS15P1-201ENST00000448836 336 ntBASIC1.21□□□□□ -2.22
UPK2O00526 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.21□□□□□ -2.22
UPK2O00526 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms