Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MIR29B2-201ENST00000385055 81 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 AL590084.2-201ENST00000401481 382 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 AL139421.1-201ENST00000423010 169 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 MTCO1P57-201ENST00000432182 261 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.15□□□□□ -2.39
HMGN4O00479 MTCYBP11-201ENST00000447254 1109 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.15□□□□□ -2.39
HMGN4O00479 AC110760.3-202ENST00000515177 371 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 AP003355.1-201ENST00000518956 587 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.15□□□□□ -2.39
HMGN4O00479 AC092451.2-201ENST00000538746 658 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
HMGN4O00479 AC137800.2-201ENST00000574375 120 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 AF038458.1-201ENST00000588406 262 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 AC022709.1-201ENST00000615967 87 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 RMST_4.1-201ENST00000616886 107 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 AC009032.1-201ENST00000617574 431 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 AL163051.2-201ENST00000618976 735 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 AC009268.2-201ENST00000621925 457 ntBASIC0.15□□□□□ -2.39
HMGN4O00479 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.15□□□□□ -2.39
HMGN4O00479 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.15□□□□□ -2.39
HMGN4O00479 CBX3P9-201ENST00000402326 552 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 MTCYBP15-201ENST00000433123 1127 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.14□□□□□ -2.39
HMGN4O00479 GAPDHP17-201ENST00000449858 1001 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 AL353718.1-201ENST00000451028 517 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 RNU6-333P-201ENST00000459117 107 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.14□□□□□ -2.39
HMGN4O00479 RNU6-760P-201ENST00000516078 97 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.14□□□□□ -2.39
HMGN4O00479 AC022861.1-201ENST00000522981 663 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.14□□□□□ -2.39
HMGN4O00479 AC136618.2-201ENST00000575091 400 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 AC133794.1-201ENST00000602731 914 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 AL590229.1-201ENST00000603497 542 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 AC105148.1-201ENST00000604961 409 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 AL390208.1-201ENST00000605885 644 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 AC106730.3-201ENST00000624568 641 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 Z69720.2-201ENST00000624755 279 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 AC010615.1-201ENST00000594254 1764 ntBASIC0.14□□□□□ -2.39
HMGN4O00479 RNU6-28P-201ENST00000362378 107 ntBASIC0.13□□□□□ -2.39
HMGN4O00479 RNU6-288P-201ENST00000363690 104 ntBASIC0.13□□□□□ -2.39
HMGN4O00479 RNY1P14-201ENST00000384426 108 ntBASIC0.13□□□□□ -2.39
HMGN4O00479 MIR942-201ENST00000401111 86 ntBASIC0.13□□□□□ -2.39
HMGN4O00479 RAB28P5-201ENST00000427490 651 ntBASIC0.13□□□□□ -2.39
HMGN4O00479 AC104651.1-201ENST00000427559 735 ntBASIC0.13□□□□□ -2.39
HMGN4O00479 AC099677.2-201ENST00000436385 175 ntBASIC0.13□□□□□ -2.39
HMGN4O00479 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.13□□□□□ -2.39
HMGN4O00479 RPL37P6-201ENST00000460682 294 ntBASIC0.13□□□□□ -2.39
HMGN4O00479 Y_RNA.676-201ENST00000516393 96 ntBASIC0.13□□□□□ -2.39
HMGN4O00479 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.13□□□□□ -2.39
HMGN4O00479 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.13□□□□□ -2.39
HMGN4O00479 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.13□□□□□ -2.39
HMGN4O00479 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.13□□□□□ -2.39
HMGN4O00479 KATNBL1P5-201ENST00000605015 517 ntBASIC0.13□□□□□ -2.39
HMGN4O00479 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.13□□□□□ -2.39
HMGN4O00479 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.13□□□□□ -2.39
HMGN4O00479 RMST_2.1-201ENST00000617263 136 ntBASIC0.13□□□□□ -2.39
HMGN4O00479 RNU6-492P-201ENST00000363035 104 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 RNU6-1210P-201ENST00000363775 107 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 Y_RNA.226-201ENST00000364337 114 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 Y_RNA.234-201ENST00000364409 97 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 RNU6-512P-201ENST00000364438 103 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.12□□□□□ -2.39
HMGN4O00479 MTCO2P5-201ENST00000422621 426 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 VN1R42P-201ENST00000424651 344 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 MTCO2P12-201ENST00000427426 682 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 AC092423.1-201ENST00000430165 186 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 MTCO3P18-201ENST00000440206 761 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 RPS20P10-201ENST00000451209 253 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 MTND1P9-201ENST00000453775 944 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 BTF3P15-201ENST00000455606 336 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.12□□□□□ -2.39
HMGN4O00479 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.12□□□□□ -2.39
HMGN4O00479 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 MTCO3P7-201ENST00000510008 774 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 SNORA31.2-201ENST00000516019 134 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 SNORD79.1-201ENST00000516069 84 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.12□□□□□ -2.39
HMGN4O00479 AC104417.1-201ENST00000523974 751 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 APOOP3-201ENST00000536787 586 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 VN1R83P-201ENST00000595685 445 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 AC008759.3-201ENST00000613300 508 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 AC093913.1-201ENST00000614178 329 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 AC084824.4-201ENST00000620106 731 ntBASIC0.12□□□□□ -2.39
HMGN4O00479 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.12□□□□□ -2.39
HMGN4O00479 RNU6-223P-201ENST00000362830 107 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 SNORA63D-201ENST00000364359 132 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 RNU6-359P-201ENST00000365466 108 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 RNU6-331P-201ENST00000384724 107 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 RNU1-119P-201ENST00000391122 165 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 MTCO1P56-201ENST00000401674 224 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 MIR1287-201ENST00000408492 90 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 RNA5SP511-201ENST00000410487 115 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 AL008629.1-201ENST00000438615 184 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 FTH1P25-201ENST00000447665 469 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 RPL39P6-201ENST00000448289 150 ntBASIC0.11□□□□□ -2.39
HMGN4O00479 snoU13.8-201ENST00000458890 104 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms