Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 snoU13.14-201ENST00000459372 104 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 AP003461.1-201ENST00000528866 78 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 GNAI2P1-201ENST00000541815 315 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.34□□□□□ -2.19
UPK1AO00322 MIR4303-201ENST00000581299 66 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 AC009977.1-201ENST00000586015 570 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 AP000240.1-201ENST00000609910 452 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 AL132822.1-201ENST00000617063 513 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 AL078595.3-201ENST00000623815 1166 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.34□□□□□ -2.19
UPK1AO00322 AC092192.1-201ENST00000633154 1018 ntBASIC1.34□□□□□ -2.19
UPK1AO00322 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
UPK1AO00322 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
UPK1AO00322 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UPK1AO00322 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
UPK1AO00322 U8.1-201ENST00000362843 134 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 SNORD113-6-201ENST00000363345 75 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 SNORA24.1-201ENST00000384401 135 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 MIR597-201ENST00000384968 97 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 RNU6-174P-201ENST00000410406 106 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 Y_RNA.608-201ENST00000410647 95 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 OR9R1P-201ENST00000412200 877 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 EIF4EP2-201ENST00000422816 654 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 MTCYBP5-201ENST00000423752 1135 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 UBE2V1P4-201ENST00000425374 344 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 AL589872.1-201ENST00000426602 288 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 HSFY7P-201ENST00000432672 318 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.33□□□□□ -2.2
UPK1AO00322 HSFY8P-201ENST00000437934 318 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 AL606662.1-201ENST00000445763 553 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK1AO00322 HSFY5P-201ENST00000453726 309 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 snoU13.23-201ENST00000458863 104 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 MTND2P33-201ENST00000506452 1031 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.33□□□□□ -2.2
UPK1AO00322 BNIP3P6-201ENST00000549284 499 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.33□□□□□ -2.2
UPK1AO00322 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 AC103987.3-201ENST00000582071 292 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UPK1AO00322 AC104010.1-201ENST00000616889 150 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 MIR7843-201ENST00000622274 79 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 AC007671.2-201ENST00000637344 619 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
UPK1AO00322 AC233981.2-201ENST00000611524 1614 ntBASIC1.33□□□□□ -2.2
UPK1AO00322 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
UPK1AO00322 RNU1-58P-201ENST00000362413 163 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 RNU6-457P-201ENST00000363999 107 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 RNU6-384P-201ENST00000364900 104 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 MIR558-201ENST00000384920 94 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 MTCYBP36-201ENST00000404146 440 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 RNU6-584P-201ENST00000410350 95 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 BTF3L4P1-201ENST00000413813 468 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 RPL21P90-201ENST00000415692 466 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.32□□□□□ -2.2
UPK1AO00322 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK1AO00322 SNRPGP13-201ENST00000442212 177 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK1AO00322 AL353752.1-201ENST00000454946 260 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK1AO00322 AC021146.2-201ENST00000504736 556 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 SCARNA1-201ENST00000517138 166 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK1AO00322 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK1AO00322 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK1AO00322 AC018630.3-201ENST00000542637 96 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK1AO00322 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.32□□□□□ -2.2
UPK1AO00322 AC015712.3-201ENST00000559380 164 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 MIR5697-201ENST00000578045 78 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 AC078795.2-201ENST00000602835 1252 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 AC063943.3-201ENST00000615562 356 ntBASIC1.32□□□□□ -2.2
UPK1AO00322 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
UPK1AO00322 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.32□□□□□ -2.2
UPK1AO00322 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
UPK1AO00322 RNU1-62P-201ENST00000362599 164 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 RNU6-527P-201ENST00000363425 104 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 RNU4-1-201ENST00000363925 141 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 SNORA17.3-201ENST00000391159 129 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 Y_RNA.597-201ENST00000410463 100 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 RNU2-8P-201ENST00000410727 190 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 RNA5SP501-201ENST00000410990 112 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.31□□□□□ -2.2
UPK1AO00322 AL512286.1-201ENST00000439244 400 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 AL357134.1-201ENST00000445848 426 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 AL360271.2-201ENST00000447710 161 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 RPL39P29-201ENST00000447779 157 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK1AO00322 RPL30P1-201ENST00000488676 339 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK1AO00322 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK1AO00322 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK1AO00322 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.31□□□□□ -2.2
UPK1AO00322 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.31□□□□□ -2.2
UPK1AO00322 AL160236.1-201ENST00000556317 195 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.31□□□□□ -2.2
UPK1AO00322 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms