Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AC114801.2-201ENST00000503825 781 ntBASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AC010587.1-201ENST00000505809 469 ntBASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AC009646.1-201ENST00000510455 318 ntBASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 MIR5697-201ENST00000578045 78 ntBASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 MIR4524B-201ENST00000581569 115 ntBASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AL031775.1-201ENST00000607014 887 ntBASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 AL157786.1-207ENST00000627771 695 ntBASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
RBFOX3A6NFN3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 RNA5SP493-201ENST00000364115 91 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 RNU2-39P-201ENST00000410604 198 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 Y_RNA.608-201ENST00000410647 95 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 MTCO2P8-201ENST00000412213 658 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 MTCO3P46-201ENST00000425787 232 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AL354941.1-201ENST00000438600 464 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 HMGB1P18-201ENST00000438801 619 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AC004854.1-201ENST00000440356 349 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AC117522.1-201ENST00000509821 380 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 MTND2P7-201ENST00000521337 640 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AP005597.4-201ENST00000526762 229 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AC087441.2-201ENST00000529141 262 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AL356057.1-201ENST00000533798 831 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 SUB1P4-201ENST00000566062 339 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 MIR3124-201ENST00000582636 67 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AC008521.1-201ENST00000587471 187 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AP000654.2-201ENST00000605633 586 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 AC063943.3-201ENST00000615562 356 ntBASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
RBFOX3A6NFN3 SNORD113-6-201ENST00000363345 75 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 MTCYBP36-201ENST00000404146 440 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AL357139.1-201ENST00000407792 426 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 MIR1304-201ENST00000408243 91 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 NCOR1P3-201ENST00000420479 303 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AL122001.1-201ENST00000457027 370 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 MTATP6P9-201ENST00000515039 680 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 SNORA25.15-201ENST00000516487 89 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC115990.1-201ENST00000526957 301 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 PCMTD1P2-201ENST00000565017 355 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 MIR5692A1-201ENST00000580523 69 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC005786.1-201ENST00000588553 154 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC018889.1-201ENST00000605372 397 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC123912.5-201ENST00000605470 343 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 MIR8074-201ENST00000615081 81 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC131159.1-201ENST00000621854 213 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC130454.1-201ENST00000622948 401 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC008993.2-201ENST00000631744 806 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 AC233981.2-201ENST00000611524 1614 ntBASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.21□□□□□ -2.22
RBFOX3A6NFN3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 RNU5F-6P-201ENST00000362979 116 ntBASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 RNU6-501P-201ENST00000364072 100 ntBASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 RNU6-61P-201ENST00000365528 109 ntBASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 RNU6-1222P-201ENST00000384615 107 ntBASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 MIR513B-201ENST00000385136 84 ntBASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 U8.13-201ENST00000390842 128 ntBASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 SNORA26.9-201ENST00000391322 122 ntBASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 RNU6-387P-201ENST00000411331 105 ntBASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 AL008987.1-201ENST00000415528 237 ntBASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 MTCO1P44-201ENST00000441935 243 ntBASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 AL357134.1-201ENST00000445848 426 ntBASIC1.2□□□□□ -2.22
RBFOX3A6NFN3 AL590365.1-201ENST00000450788 243 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms